public IResult Match(IGlycanPeak glycan, SortedDictionary <int, List <IPeak> > cluster)
{
List <SortedDictionary <int, IPeak> > clustered = Combinator(cluster);
List <double> distr = glycan.GetDistrib();
double maxScore = -1;
List <IPeak> bestPeaks = new List <IPeak>();
foreach (SortedDictionary <int, IPeak> sequence in clustered)
{
double score = Fit(distr, sequence);
if (score >= maxScore)
{
maxScore = score;
bestPeaks = sequence.Select(s => s.Value).ToList();
}
}
return(factory.Produce(glycan, maxScore, bestPeaks));
}
public IResult Produce(IGlycanPeak glycan, double score, List <IPeak> peaks)
{
return(new NGlycanResult(glycan, score, peaks));
}
public void SetGlycan(IGlycanPeak glycan)
{
this.glycan = glycan;
}
public NGlycanResult(IGlycanPeak glycan, double score, List <IPeak> peaks)
{
this.glycan = glycan;
this.score = score;
this.peaks = peaks;
}
