public IntegrationTestCosmosDataStore()
{
_cosmosDataStoreConfiguration = new CosmosDataStoreConfiguration
{
Host = Environment.GetEnvironmentVariable("CosmosDb:Host") ?? CosmosDbLocalEmulator.Host,
Key = Environment.GetEnvironmentVariable("CosmosDb:Key") ?? CosmosDbLocalEmulator.Key,
DatabaseId = Environment.GetEnvironmentVariable("CosmosDb:DatabaseId") ?? "FhirTests",
AllowDatabaseCreation = true,
PreferredLocations = Environment.GetEnvironmentVariable("CosmosDb:PreferredLocations")?.Split(';', StringSplitOptions.RemoveEmptyEntries),
};
_cosmosCollectionConfiguration = new CosmosCollectionConfiguration
{
CollectionId = Guid.NewGuid().ToString(),
};
var fhirStoredProcs = typeof(IFhirStoredProcedure).Assembly
.GetTypes()
.Where(x => !x.IsAbstract && typeof(IFhirStoredProcedure).IsAssignableFrom(x))
.ToArray()
.Select(type => (IFhirStoredProcedure)Activator.CreateInstance(type));
var optionsMonitor = Substitute.For <IOptionsMonitor <CosmosCollectionConfiguration> >();
optionsMonitor.Get(CosmosDb.Constants.CollectionConfigurationName).Returns(_cosmosCollectionConfiguration);
var updaters = new IFhirCollectionUpdater[]
{
new FhirCollectionSettingsUpdater(_cosmosDataStoreConfiguration, optionsMonitor, NullLogger <FhirCollectionSettingsUpdater> .Instance),
new FhirStoredProcedureInstaller(fhirStoredProcs),
};
var dbLock = new CosmosDbDistributedLockFactory(Substitute.For <Func <IScoped <IDocumentClient> > >(), NullLogger <CosmosDbDistributedLock> .Instance);
var upgradeManager = new FhirCollectionUpgradeManager(updaters, _cosmosDataStoreConfiguration, optionsMonitor, dbLock, NullLogger <FhirCollectionUpgradeManager> .Instance);
IDocumentClientTestProvider testProvider = new DocumentClientReadWriteTestProvider();
var documentClientInitializer = new DocumentClientInitializer(testProvider, NullLogger <DocumentClientInitializer> .Instance);
_documentClient = documentClientInitializer.CreateDocumentClient(_cosmosDataStoreConfiguration);
var fhirCollectionInitializer = new CollectionInitializer(_cosmosCollectionConfiguration.CollectionId, _cosmosDataStoreConfiguration, _cosmosCollectionConfiguration.InitialCollectionThroughput, upgradeManager, NullLogger <CollectionInitializer> .Instance);
documentClientInitializer.InitializeDataStore(_documentClient, _cosmosDataStoreConfiguration, new List <ICollectionInitializer> {
fhirCollectionInitializer
}).GetAwaiter().GetResult();
var cosmosDocumentQueryFactory = new FhirCosmosDocumentQueryFactory(Substitute.For <IFhirRequestContextAccessor>(), NullFhirDocumentQueryLogger.Instance);
var fhirRequestContextAccessor = new FhirRequestContextAccessor();
_dataStore = new FhirDataStore(
new NonDisposingScope(_documentClient),
_cosmosDataStoreConfiguration,
cosmosDocumentQueryFactory,
new RetryExceptionPolicyFactory(_cosmosDataStoreConfiguration),
fhirRequestContextAccessor,
optionsMonitor,
NullLogger <FhirDataStore> .Instance);
}
public CollectionUpgradeManagerTests()
{
var factory = Substitute.For <ICosmosDbDistributedLockFactory>();
var cosmosDbDistributedLock = Substitute.For <ICosmosDbDistributedLock>();
var collectionVersionWrappers = Substitute.For <IQueryable <CollectionVersion>, IDocumentQuery <CollectionVersion> >();
var optionsMonitor = Substitute.For <IOptionsMonitor <CosmosCollectionConfiguration> >();
optionsMonitor.Get(Constants.CollectionConfigurationName).Returns(_cosmosCollectionConfiguration);
factory.Create(Arg.Any <IDocumentClient>(), Arg.Any <Uri>(), Arg.Any <string>()).Returns(cosmosDbDistributedLock);
cosmosDbDistributedLock.TryAcquireLock().Returns(true);
_client = Substitute.For <IDocumentClient>();
_client.CreateDocumentQuery <CollectionVersion>(Arg.Any <string>(), Arg.Any <SqlQuerySpec>(), Arg.Any <FeedOptions>())
.Returns(collectionVersionWrappers);
collectionVersionWrappers.AsDocumentQuery().ExecuteNextAsync <CollectionVersion>().Returns(new FeedResponse <CollectionVersion>(new List <CollectionVersion>()));
var updaters = new IFhirCollectionUpdater[] { new FhirCollectionSettingsUpdater(_cosmosDataStoreConfiguration, optionsMonitor, NullLogger <FhirCollectionSettingsUpdater> .Instance), };
_manager = new FhirCollectionUpgradeManager(updaters, _cosmosDataStoreConfiguration, optionsMonitor, factory, NullLogger <FhirCollectionUpgradeManager> .Instance);
}
public async Task InitializeAsync()
{
var fhirStoredProcs = typeof(IFhirStoredProcedure).Assembly
.GetTypes()
.Where(x => !x.IsAbstract && typeof(IFhirStoredProcedure).IsAssignableFrom(x))
.ToArray()
.Select(type => (IFhirStoredProcedure)Activator.CreateInstance(type));
var optionsMonitor = Substitute.For <IOptionsMonitor <CosmosCollectionConfiguration> >();
optionsMonitor.Get(CosmosDb.Constants.CollectionConfigurationName).Returns(_cosmosCollectionConfiguration);
Type searchDefinitionManagerType = typeof(SearchParameterDefinitionManager);
var searchParameterDefinitionManager = new SearchParameterDefinitionManager(new FhirJsonParser(), ModelInfoProvider.Instance);
searchParameterDefinitionManager.Start();
_filebasedSearchParameterRegistry = new FilebasedSearchParameterRegistry(
searchParameterDefinitionManager,
searchDefinitionManagerType.Assembly,
$"{searchDefinitionManagerType.Namespace}.unsupported-search-parameters.json");
var updaters = new IFhirCollectionUpdater[]
{
new FhirCollectionSettingsUpdater(_cosmosDataStoreConfiguration, optionsMonitor, NullLogger <FhirCollectionSettingsUpdater> .Instance),
new FhirStoredProcedureInstaller(fhirStoredProcs),
new CosmosDbStatusRegistryInitializer(
() => _filebasedSearchParameterRegistry,
new FhirCosmosDocumentQueryFactory(
new CosmosResponseProcessor(Substitute.For <IFhirRequestContextAccessor>(), Substitute.For <IMediator>(), NullLogger <CosmosResponseProcessor> .Instance),
NullFhirDocumentQueryLogger.Instance)),
};
var dbLock = new CosmosDbDistributedLockFactory(Substitute.For <Func <IScoped <IDocumentClient> > >(), NullLogger <CosmosDbDistributedLock> .Instance);
var upgradeManager = new FhirCollectionUpgradeManager(updaters, _cosmosDataStoreConfiguration, optionsMonitor, dbLock, NullLogger <FhirCollectionUpgradeManager> .Instance);
IDocumentClientTestProvider testProvider = new DocumentClientReadWriteTestProvider();
var fhirRequestContextAccessor = new FhirRequestContextAccessor();
var cosmosResponseProcessor = Substitute.For <ICosmosResponseProcessor>();
var documentClientInitializer = new FhirDocumentClientInitializer(testProvider, fhirRequestContextAccessor, cosmosResponseProcessor, NullLogger <FhirDocumentClientInitializer> .Instance);
_documentClient = documentClientInitializer.CreateDocumentClient(_cosmosDataStoreConfiguration);
var fhirCollectionInitializer = new CollectionInitializer(_cosmosCollectionConfiguration.CollectionId, _cosmosDataStoreConfiguration, _cosmosCollectionConfiguration.InitialCollectionThroughput, upgradeManager, NullLogger <CollectionInitializer> .Instance);
// Cosmos DB emulators throws errors when multiple collections are initialized concurrently.
// Use the semaphore to only allow one initialization at a time.
await CollectionInitializationSemaphore.WaitAsync();
try
{
await documentClientInitializer.InitializeDataStore(_documentClient, _cosmosDataStoreConfiguration, new List <ICollectionInitializer> {
fhirCollectionInitializer
});
}
finally
{
CollectionInitializationSemaphore.Release();
}
var cosmosDocumentQueryFactory = new FhirCosmosDocumentQueryFactory(cosmosResponseProcessor, NullFhirDocumentQueryLogger.Instance);
var documentClient = new NonDisposingScope(_documentClient);
_fhirDataStore = new CosmosFhirDataStore(
documentClient,
_cosmosDataStoreConfiguration,
optionsMonitor,
cosmosDocumentQueryFactory,
new RetryExceptionPolicyFactory(_cosmosDataStoreConfiguration),
NullLogger <CosmosFhirDataStore> .Instance,
new VersionSpecificModelInfoProvider(),
Options.Create(new CoreFeatureConfiguration()));
_fhirOperationDataStore = new CosmosFhirOperationDataStore(
documentClient,
_cosmosDataStoreConfiguration,
optionsMonitor,
new RetryExceptionPolicyFactory(_cosmosDataStoreConfiguration),
NullLogger <CosmosFhirOperationDataStore> .Instance);
_fhirStorageTestHelper = new CosmosDbFhirStorageTestHelper(
_documentClient,
_cosmosDataStoreConfiguration.DatabaseId,
_cosmosCollectionConfiguration.CollectionId);
}
