} // used to find overlap genes for now
public PositionBuffer(ICodonInfoProvider codonInfoProvider, IIntervalForest <IGene> geneIntervalForest)
{
CodonInfoProvider = codonInfoProvider;
GeneIntervalForest = geneIntervalForest;
CurrentChromosome = new EmptyChromosome(string.Empty);
BufferedPositions = BufferedPositions.CreatEmptyBufferedPositions();
}
public PositionProcessor(IPositionBuffer positionBuffer, ICodonInfoProvider codonInfoProvider, IVariantGenerator variantGenerator)
{
_positionBuffer = positionBuffer;
_codonInfoProvider = codonInfoProvider;
_variantGenerator = variantGenerator;
}
