private void timer1_Tick(object sender, EventArgs e)
{
timer1.Enabled = false;
label2.Text = GGKUtilLib.getKitName(kit);
txtSNPs.Text = GGKUtilLib.queryValue("kit_ysnps", new string[] { "ysnps" }, "where kit_no='" + kit + "'");
GGKUtilLib.setStatus("Plotting on ISOGG Y-Tree ...");
//
XDocument doc = XDocument.Parse(Genetic_Genealogy_Kit.Properties.Resources.ytree);
TreeNode root = new TreeNode("Adam");
treeView1.Nodes.Add(root);
foreach (XElement el in doc.Root.Elements())
{
buildTree(root, el);
}
root.Expand();
//
snp_on_tree.AddRange(Genetic_Genealogy_Kit.Properties.Resources.snps_on_tree.Split(new char[] { ',' }));
my_snp = txtSNPs.Text;
snp_array = filterSNPsOnTree(my_snp);
timer2.Enabled = true;
}
private void MitoMapFrm_Load(object sender, EventArgs e)
{
string csv = Genetic_Genealogy_Kit.Properties.Resources.mtdna_map;
StreamReader reader = new StreamReader(new MemoryStream(Encoding.ASCII.GetBytes(csv)));
string line = null;
string[] data = null;
Series series = series = mtdna_chart.Series[0];
//Map Locus Starting Ending bp Length Shorthand Description
dgvmtdna.Rows.Clear();
while ((line = reader.ReadLine()) != null)
{
data = line.Split(new char[] { ',' });
DataPoint dp = new DataPoint();
dp.IsVisibleInLegend = false;
dp.Label = data[0];
dp.YValues = new double[] { int.Parse(data[3]) };
dp.CustomProperties = "PieLineColor=Black, PieLabelStyle=Outside, Exploded=True";
series.Points.Add(dp);
//
dgvmtdna.Rows.Add(new object[] { data[0], data[1], data[2], data[3], data[4], data[5] });
}
reader.Close();
//
RSRS = GGKUtilLib.getRSRS();
for (int i = 0; i < RSRS.Length; i++)
{
nucleotides.Add(i + 1, new string[] { (i + 1).ToString(), RSRS[i].ToString(), RSRS[i].ToString() });
}
mutations = GGKUtilLib.queryValue("kit_mtdna", new string[] { "mutations" }, "where kit_no='" + kit + "'");
dgvNucleotides.Columns[2].HeaderText = GGKUtilLib.getKitName(kit) + " (" + kit + ")";
dgvmtdna.Columns[3].Visible = false;
loadKitMutations();
}
private void timer1_Tick(object sender, EventArgs e)
{
timer1.Enabled = false;
GGKUtilLib.enableSave();
//
XDocument doc = XDocument.Parse(xml_phylogeny);
TreeNode root = new TreeNode("Eve");
treeView1.Nodes.Add(root);
foreach (XElement el in doc.Root.Elements())
{
buildTree(root, el);
}
root.Expand();
//
string mutations = GGKUtilLib.queryValue("kit_mtdna", new string[] { "mutations" }, "where kit_no='" + kit + "'");
txtSNPs.Text = mutations;
//
markOnTree();
}