public void TestParallelFeatureDetection()
{
const string uimfFilePath = @"\\proto-2\UnitTest_Files\MultidimensionalFeatureFinding\BSA_10ugml_IMS6_TOF03_CID_27Aug12_Frodo_Collision_Energy_Collapsed.UIMF";
var uimfUtil = new UimfUtil(uimfFilePath);
var featureDetectionUtil = new FeatureDetectionUtil(uimfFilePath, 11, 4);
var minTargetBin = uimfUtil.GetBinFromMz(500.0);
var maxTargetBin = uimfUtil.GetBinFromMz(600.0);
var targetMzList = Enumerable.Range(minTargetBin, maxTargetBin - minTargetBin + 1).Select(uimfUtil.GetMzFromBin).ToList();
featureDetectionUtil.GetFeatureStatistics(targetMzList, 15, UIMFData.FrameType.MS1, DataReader.ToleranceType.PPM);
}
public Dictionary <int, FeatureSet> GetFeaturesMultiThreading(int minTargetBin, int maxTargetBin, Tolerance tolerance, DataReader.FrameType frameType)
{
var featureDictionary = new Dictionary <int, FeatureSet>();
var targetMzList = Enumerable.Range(minTargetBin, maxTargetBin - minTargetBin + 1).Select(targetBin => _uimfUtil.GetMzFromBin(targetBin)).ToList();
var featureStatisticsDictionary = _featureDetectionUtil.GetFeatureStatistics(targetMzList, tolerance.GetValue(), frameType,
tolerance.GetUnit() == ToleranceUnit.Ppm ? DataReader.ToleranceType.PPM : DataReader.ToleranceType.Thomson);
foreach (var entry in featureStatisticsDictionary)
{
var targetBin = _uimfUtil.GetBinFromMz(entry.Key);
var featureStats = entry.Value;
featureDictionary.Add(targetBin, new FeatureSet(featureStats));
}
return(featureDictionary);
}
