//---------------------------------------------------------------------
///<summary>
///Initialize an Epidemic - defined as an agent outbreak for an entire landscape
///at a single BDA timestep. One epidemic per agent per BDA timestep
///</summary>
public static void Initialize(IAgent agent)
{
UI.WriteLine("Initializing agent {0}.", agent.AgentName);
ecoregions = Model.Core.Ecoregions;
//successionPlugIn = Model.Core.GetSuccession();
//cohorts = Model.Core.SuccessionCohorts as ILandscapeCohorts;
//if (cohorts == null)
// throw new System.ApplicationException("Error: Cohorts don't support age-cohort interface");
//.ActiveSiteValues allows you to reset all active site at once.
SiteVars.NeighborResourceDom.ActiveSiteValues = 0;
SiteVars.Vulnerability.ActiveSiteValues = 0;
SiteVars.SiteResourceDomMod.ActiveSiteValues = 0;
SiteVars.SiteResourceDom.ActiveSiteValues = 0;
foreach (ActiveSite site in Model.Core.Landscape)
{
if (agent.OutbreakZone[site] == Zone.Newzone)
{
agent.OutbreakZone[site] = Zone.Lastzone;
}
else
{
agent.OutbreakZone[site] = Zone.Nozone;
}
}
}
//---------------------------------------------------------------------
public ParametersParser(Ecoregions.IDataset ecoregionDataset,
Species.IDataset speciesDataset,
int startYear,
int endYear)
: base(ecoregionDataset,
speciesDataset)
{
this.ecoregionDataset = ecoregionDataset;
this.speciesDataset = speciesDataset;
ClimateChange.InputValidation.Initialize(startYear, endYear);
}
public void Init()
{
Ecoregions.DatasetParser ecoregionsParser = new Ecoregions.DatasetParser();
reader = OpenFile("Ecoregions.txt");
try {
ecoregionDataset = ecoregionsParser.Parse(reader);
}
finally {
reader.Close();
}
Species.DatasetParser speciesParser = new Species.DatasetParser();
reader = OpenFile("Species.txt");
try {
speciesDataset = speciesParser.Parse(reader);
}
finally {
reader.Close();
}
parser = new ParametersParser(ecoregionDataset, speciesDataset);
}
//---------------------------------------------------------------------
public static void Initialize(IFireParameters[] eventParameters,
IFireCurve[] fireCurves,
IWindCurve[] windCurves,
IDamageTable[] damages)
{
FireEventParms = eventParameters;
FireCurves = fireCurves;
WindCurves = windCurves;
Event.damages = damages;
ecoregions = Model.Ecoregions;
successionPlugIn = Model.GetSuccession<AgeCohort.ICohort>();
cohorts = successionPlugIn.Cohorts;
}
//---------------------------------------------------------------------
///<summary>
///Initialize an Epidemic - defined as an agent outbreak for an entire landscape
///at a single BDA timestep. One epidemic per agent per BDA timestep
///</summary>
public static void Initialize(IAgent agent)
{
UI.WriteLine("Initializing agent {0}.", agent.AgentName);
ecoregions = Model.Core.Ecoregions;
//successionPlugIn = Model.Core.GetSuccession();
//cohorts = Model.Core.SuccessionCohorts as ILandscapeCohorts;
//if (cohorts == null)
// throw new System.ApplicationException("Error: Cohorts don't support age-cohort interface");
//.ActiveSiteValues allows you to reset all active site at once.
SiteVars.NeighborResourceDom.ActiveSiteValues = 0;
SiteVars.Vulnerability.ActiveSiteValues = 0;
SiteVars.SiteResourceDomMod.ActiveSiteValues = 0;
SiteVars.SiteResourceDom.ActiveSiteValues = 0;
foreach (ActiveSite site in Model.Core.Landscape)
{
if(agent.OutbreakZone[site] == Zone.Newzone)
agent.OutbreakZone[site] = Zone.Lastzone;
else
agent.OutbreakZone[site] = Zone.Nozone;
}
}
//---------------------------------------------------------------------
private static void LoadEcoregions(string path)
{
Log.Info("Loading ecoregions from file \"{0}\" ...", path);
Ecoregions.DatasetParser parser = new Ecoregions.DatasetParser();
ecoregions = Data.Load <Ecoregions.IDataset>(path, parser);
}
//---------------------------------------------------------------------
private void LoadEcoregions(string path)
{
UI.WriteLine("Loading ecoregions from file \"{0}\" ...", path);
Ecoregions.DatasetParser parser = new Ecoregions.DatasetParser();
ecoregions = Data.Load <Ecoregions.IDataset>(path, parser);
}
