private void mbtnAddMicromass_Click(object sender, System.EventArgs e)
{
var fld_browser = new FolderBrowserDialog();
fld_browser.Description = "Please select Micromass .raw folder";
fld_browser.ShowNewFolderButton = false;
var res = fld_browser.ShowDialog(this);
if (res != DialogResult.OK)
{
return;
}
mstrInFile = fld_browser.SelectedPath;
mtxtFile.Text = fld_browser.SelectedPath;
menmFileType = DeconToolsV2.Readers.FileType.MICROMASSRAWDATA;
}
public static DeconTools.Backend.Globals.MSFileType ConvertDeconEngineFileType(DeconToolsV2.Readers.FileType filetype)
{
switch (filetype)
{
case DeconToolsV2.Readers.FileType.AGILENT_TOF:
return(Globals.MSFileType.Agilent_WIFF);
case DeconToolsV2.Readers.FileType.ASCII:
return(Globals.MSFileType.Ascii);
case DeconToolsV2.Readers.FileType.BRUKER:
return(Globals.MSFileType.Bruker);
case DeconToolsV2.Readers.FileType.BRUKER_ASCII:
return(Globals.MSFileType.Bruker_Ascii);
case DeconToolsV2.Readers.FileType.FINNIGAN:
return(Globals.MSFileType.Finnigan);
case DeconToolsV2.Readers.FileType.ICR2LSRAWDATA:
return(Globals.MSFileType.ICR2LS_Rawdata);
case DeconToolsV2.Readers.FileType.MICROMASSRAWDATA:
return(Globals.MSFileType.Micromass_Rawdata);
case DeconToolsV2.Readers.FileType.MZXMLRAWDATA:
return(Globals.MSFileType.MZXML_Rawdata);
case DeconToolsV2.Readers.FileType.PNNL_IMS:
return(Globals.MSFileType.PNNL_IMS);
case DeconToolsV2.Readers.FileType.PNNL_UIMF:
return(Globals.MSFileType.PNNL_UIMF);
case DeconToolsV2.Readers.FileType.SUNEXTREL:
return(Globals.MSFileType.SUNEXTREL);
case DeconToolsV2.Readers.FileType.UNDEFINED:
return(Globals.MSFileType.Undefined);
default:
return(Globals.MSFileType.Undefined);
}
}
#pragma warning disable 618
private void mbtnFileSelect_Click(object sender, System.EventArgs e)
{
try
{
var openFileDialog1 = new OpenFileDialog();
openFileDialog1.Filter = "Xcalibur files (*.RAW)|*.RAW|Agilent files (*.wiff)|*.wiff|Micromass files (_FUNC*.DAT)|_FUNC*.DAT|PNNL IMF files (*.IMF)|*.IMF|Bruker files(acqu)|acqu|MZ XML files (*.mzxml)|*.mzXML|S files(*.*)|*.*|PNNL UIMF files (*.UIMF)|*.UIMF";
openFileDialog1.FilterIndex = 1;
openFileDialog1.Multiselect = true;
openFileDialog1.RestoreDirectory = true;
if (openFileDialog1.ShowDialog() == DialogResult.OK)
{
var num_files = openFileDialog1.FileNames.Length;
for (var i = 0; i < num_files; i++)
{
var file_name = openFileDialog1.FileNames[i];
var index = file_name.LastIndexOf("\\");
var path_dir = "";
if (index > 0)
{
path_dir = file_name.Substring(0, index);
}
string outfile_name;
switch (openFileDialog1.FilterIndex)
{
case 1:
// Open Xcalibur File.
outfile_name = file_name.Substring(0, file_name.Length - 4);
mstrInFile = file_name;
menmFileType = DeconToolsV2.Readers.FileType.FINNIGAN;
break;
case 2:
// Open Agilent File
outfile_name = file_name.Substring(0, file_name.Length - 4);
mstrInFile = file_name;
menmFileType = DeconToolsV2.Readers.FileType.AGILENT_TOF;
break;
case 3:
// Open Micromass File
outfile_name = path_dir.Substring(0, path_dir.Length - 4);
mstrInFile = path_dir;
menmFileType = DeconToolsV2.Readers.FileType.MICROMASSRAWDATA;
break;
case 4:
// Open PNNL IMF File
outfile_name = file_name.Substring(0, file_name.Length - 4);
mstrInFile = file_name;
menmFileType = DeconToolsV2.Readers.FileType.PNNL_IMS;
break;
case 5:
// Open Bruker File
outfile_name = file_name.Substring(0, file_name.Length - 4);
mstrInFile = file_name;
menmFileType = DeconToolsV2.Readers.FileType.BRUKER;
break;
case 6:
// Open MZXML file
outfile_name = file_name;
mstrInFile = file_name;
menmFileType = DeconToolsV2.Readers.FileType.MZXMLRAWDATA;
break;
case 7:
// Open S file (ICR2LS format) file
outfile_name = file_name;
mstrInFile = file_name;
menmFileType = DeconToolsV2.Readers.FileType.ICR2LSRAWDATA;
break;
default:
break;
}
}
mtxtFile.Text = mstrInFile;
}
}
catch (Exception ex)
{
MessageBox.Show(ex.ToString());
}
}
public static DeconTools.Backend.Globals.MSFileType ConvertDeconEngineFileType(DeconToolsV2.Readers.FileType filetype)
{
#pragma warning disable CS0618 // Type or member is obsolete
switch (filetype)
{
case DeconToolsV2.Readers.FileType.AGILENT_TOF:
return(Globals.MSFileType.Agilent_WIFF);
case DeconToolsV2.Readers.FileType.ASCII:
return(Globals.MSFileType.Ascii);
case DeconToolsV2.Readers.FileType.BRUKER:
return(Globals.MSFileType.Bruker);
case DeconToolsV2.Readers.FileType.BRUKER_ASCII:
return(Globals.MSFileType.Bruker_Ascii);
case DeconToolsV2.Readers.FileType.FINNIGAN:
return(Globals.MSFileType.Thermo_Raw);
case DeconToolsV2.Readers.FileType.ICR2LSRAWDATA:
return(Globals.MSFileType.ICR2LS_Rawdata);
case DeconToolsV2.Readers.FileType.MICROMASSRAWDATA:
return(Globals.MSFileType.Micromass_Rawdata);
case DeconToolsV2.Readers.FileType.MZXMLRAWDATA:
return(Globals.MSFileType.MZXML_Rawdata);
case DeconToolsV2.Readers.FileType.PNNL_IMS:
return(Globals.MSFileType.PNNL_IMS);
case DeconToolsV2.Readers.FileType.PNNL_UIMF:
return(Globals.MSFileType.PNNL_UIMF);
case DeconToolsV2.Readers.FileType.SUNEXTREL:
return(Globals.MSFileType.SUNEXTREL);
case DeconToolsV2.Readers.FileType.UNDEFINED:
return(Globals.MSFileType.Undefined);
default:
return(Globals.MSFileType.Undefined);
}
#pragma warning restore CS0618 // Type or member is obsolete
}