/// <summary>
///
/// </summary>
private void InitializeDbTables()
{
DbCreator dbCreate = new DbCreator();
if (dbCreate.IsTableExist(ProtCidSettings.protcidDbConnection, crystBuInterfaceCompTables[(int)BuType.PDB].TableName))
{
return;
}
string createTableString = string.Format("Create Table {0} ( " +
"PdbID CHAR(4) NOT NULL, InterfaceId INTEGER NOT NULL, " +
"BuID VARCHAR(8), BuInterfaceID INTEGER, QScore FLOAT);",
crystBuInterfaceCompTables[(int)BuType.PDB].TableName);
dbCreate.CreateTableFromString(ProtCidSettings.protcidDbConnection, createTableString, crystBuInterfaceCompTables[(int)BuType.PDB].TableName);
string indexString = string.Format("Create INDEX {0}_Idx1 " +
" ON {0} (PdbID, InterfaceID);", crystBuInterfaceCompTables[(int)BuType.PDB].TableName);
dbCreate.CreateIndex(ProtCidSettings.protcidDbConnection, indexString, crystBuInterfaceCompTables[(int)BuType.PDB].TableName);
createTableString = string.Format("Create Table {0} ( " +
"PdbID CHAR(4) NOT NULL, InterfaceId INTEGER NOT NULL, " +
"BuID VARCHAR(8), BuInterfaceID INTEGER, QScore FLOAT);",
crystBuInterfaceCompTables[(int)BuType.PISA].TableName);
dbCreate.CreateTableFromString(ProtCidSettings.protcidDbConnection, createTableString, crystBuInterfaceCompTables[(int)BuType.PISA].TableName);
indexString = string.Format("Create INDEX {0}_Idx1 " +
" ON {0} (PdbID, InterfaceID);", crystBuInterfaceCompTables[(int)BuType.PISA].TableName);
dbCreate.CreateIndex(ProtCidSettings.protcidDbConnection, indexString, crystBuInterfaceCompTables[(int)BuType.PISA].TableName);
}
private void InitializeDbTable()
{
DbCreator dbCreator = new DbCreator();
if (!dbCreator.IsTableExist(ProtCidSettings.buCompConnection, buGroupTable.TableName))
{
string createTableString = "Create Table " + buGroupTable.TableName + " ( " +
" GroupSeqID INTEGER NOT NULL, " +
" PdbID CHAR(4) NOT NULL, " +
" BuID VARCHAR(8) NOT NULL, " +
" EntityFormat VARCHAR(255) NOT NULL, " +
" AsymFormat VARCHAR(255) NOT NULL, " +
" AbcFormat VARCHAR(255) NOT NULL );";
dbCreator.CreateTableFromString(ProtCidSettings.buCompConnection, createTableString, buGroupTable.TableName);
string createIndexString = "Create INDEX " + buGroupTable.TableName + "_Idx1 ON " +
buGroupTable.TableName + "(PdbID, BuID);";
dbCreator.CreateIndex(ProtCidSettings.buCompConnection, createIndexString, buGroupTable.TableName);
createIndexString = "Create INDEX " + buGroupTable.TableName + "_idx2 ON " +
buGroupTable.TableName + "(GroupSeqID);";
dbCreator.CreateIndex(ProtCidSettings.buCompConnection, createIndexString, buGroupTable.TableName);
}
if (!dbCreator.IsTableExist(ProtCidSettings.buCompConnection, groupTable.TableName))
{
string createTableString = "Create Table " + groupTable.TableName + " ( " +
" GroupSeqID INTEGER NOT NULL, " +
" FamilyString BLOB Sub_Type Text NOT NULL);";
dbCreator.CreateTableFromString(ProtCidSettings.buCompConnection, createTableString, groupTable.TableName);
/* string createIndexString = "Create INDEX " + groupTable.TableName + "_idx1 ON " +
* groupTable.TableName + "(GroupSeqID);";
* dbCreator.CreateTable(ProtCidSettings.buCompConnection, createIndexString, groupTable.TableName);*/
}
}
/// <summary>
///
/// </summary>
private void InitializeDbTable()
{
DbCreator dbCreator = new DbCreator();
if (!dbCreator.IsTableExist(ProtCidSettings.buCompConnection, domainInterfaceCompTable.TableName))
{
string createTableString = "CREATE TABLE " + domainInterfaceCompTable.TableName + " ( " +
"RelSeqID INTEGER NOT NULL, " +
"PdbID1 VARCHAR(4) NOT NULL, " +
"PdbID2 VARCHAR(4) NOT NULL, " +
"BuID1 VARCHAR(8) NOT NULL, " +
"BuID2 VARCHAR(8) NOT NULL, " +
"DomainInterfaceID1 INTEGER NOT NULL, " +
"DomainInterfaceID2 INTEGER NOT NULL, " +
"Qscore FLOAT NOT NULL);";
dbCreator.CreateTableFromString(ProtCidSettings.buCompConnection, createTableString, domainInterfaceCompTable.TableName);
}
}