private void filter_btn(object sender, RoutedEventArgs e)
{
int mix_num = 0;
if (this.filter_mix_num.Text != "")
{
if (!Config_Help.IsIntegerAllowed(this.filter_mix_num.Text))
{
return;
}
mix_num = int.Parse(this.filter_mix_num.Text);
}
string title = this.title_subStr_txt.Text;
string sq = this.sq_subStr_txt.Text;
double ratio = 1024.0;
double ratio2 = 0.0;
if (this.ratio1_tbx.Text != "")
{
ratio = double.Parse(this.ratio1_tbx.Text);
}
if (this.ratio2_tbx.Text != "")
{
ratio2 = double.Parse(this.ratio2_tbx.Text);
}
pLink.pLink_Result pLink_result = mainW.pLink_result;
ObservableCollection <pLink.PSM> all_psms = pLink_result.psms;
all_psms = filter_by_title(all_psms, title);
all_psms = filter_by_sq(all_psms, sq);
all_psms = filter_by_mixNumber(all_psms, mix_num);
all_psms = filter_byRatio_Less(all_psms, ratio);
all_psms = filter_byRatio_Bigger(all_psms, ratio2);
mainW.data.ItemsSource = all_psms;
mainW.display_size.Text = all_psms.Count + "";
}
public void report_word()
{
mainW.initial_Protein();
List <string> all_pngs = report_image();
string information = "Dear users of pFind3, you search $ raw file(s) in this run, there are $ ms2 scans. In your searching and filter parameters($), pFind3 report $ credible psms, corresponding to $ scans, raw rate is $. Graph $ shows relevant details. This searching result shows $ peptides and $ proteins.";
//"尊敬的pFind用户，您这次搜索了$个raw文件，共有二级谱$张。在您设置的搜索、过滤参数$下，pFind3报告可信的肽谱匹配$个，对应二级谱$张，解析率为$。图$展示了相关细节。该搜索结果，对应肽段序列$条，蛋白质$个。"
string[] args = new string[10];
args[0] = (mainW.summary_result_information.raw_rates.Count - 1) + "";
args[1] = mainW.summary_result_information.scans_number.ToString("N0");
args[2] = "FDR ≤ " + Config_Help.fdr_value.ToString("F2");
args[3] = mainW.summary_result_information.spectra_number.ToString("N0");
args[4] = args[1];
args[5] = mainW.summary_result_information.raw_rates.Last().Rate.ToString("P2");
args[6] = " 1 - " + all_pngs.Count + " "; //
args[7] = mainW.summary_result_information.peptides_number.ToString("N0");
args[8] = mainW.protein_panel.identification_proteins.Count.ToString("N0");
args[9] = " 1 - 2 ";
information = Config_Help.getReport(information, args);
string folder = mainW.task.folder_result_path + "\\" + File_Help.pBuild_tmp_file;
if (!Directory.Exists(folder))
{
Directory.CreateDirectory(folder);
}
try
{
Document document = new Document();
ParagraphStyle style = new ParagraphStyle(document);
style.Name = "FontStyle";
style.CharacterFormat.FontSize = 12;
document.Styles.Add(style);
ParagraphStyle style2 = new ParagraphStyle(document);
style2.Name = "FontStyle2";
style2.CharacterFormat.FontSize = 14;
document.Styles.Add(style2);
Section s = document.AddSection();
Paragraph p = s.AddParagraph();
p.ApplyStyle(style2.Name);
p.AppendText(information);
for (int i = 0; i < all_pngs.Count; ++i)
{
string flag = "";
switch (i)
{
case 0:
flag = "Mixed spectra percentage"; //混合谱图比例
break;
case 1:
flag = "Cleavage percentage"; //酶切情况
break;
case 2:
flag = "Modification percentage"; //修饰情况
break;
case 3:
flag = "Peptide length percentage"; //肽段长度比例
break;
case 4:
flag = "Id rate"; //谱图解析率
break;
case 5:
flag = "Quantification ratio distribution"; //定量比值分布图
break;
}
p = s.AddParagraph();
p.ApplyStyle(style.Name);
p.Format.HorizontalAlignment = Spire.Doc.Documents.HorizontalAlignment.Center;
p.AppendText("Graph " + (i + 1) + " ：" + flag);
DocPicture pic = p.AppendPicture(Image.FromFile(all_pngs[i])); //DocPicture pic =
pic.HorizontalAlignment = ShapeHorizontalAlignment.Center;
//pic.Width = 450;
//pic.Height = 468;
}
document.SaveToFile(mainW.task.folder_result_path + "\\" + File_Help.pBuild_tmp_file + "\\report.docx", FileFormat.Docx);
System.Diagnostics.Process.Start(mainW.task.folder_result_path + "\\" + File_Help.pBuild_tmp_file + "\\report.docx");
}
catch (Exception exe)
{
System.Windows.MessageBox.Show(exe.ToString());
}
}
