public static void TestCompactPeptideSerialization()
{
// purpose of this test is to serialize/deserialize a CompactPeptide and make sure the deserialized peptide
// has the same properties as before it was serialized. This peptide is unmodified
string sequence = "PEPTIDE";
PeptideWithSetModifications p = new PeptideWithSetModifications(sequence, new Dictionary <string, Modification>(), 0, null, null, 0, 7, 0, null);
CompactPeptide cp = p.CompactPeptide(FragmentationTerminus.Both);
CompactPeptide deserializedCp = null;
string dir = System.IO.Path.Combine(TestContext.CurrentContext.TestDirectory, "TestCompactPeptideSerialization");
System.IO.Directory.CreateDirectory(dir);
string path = System.IO.Path.Combine(dir, "myCompactPeptideIndex.ind");
var messageTypes = typeof(CompactPeptide);
var ser = new NetSerializer.Serializer(new List <Type> {
messageTypes
});
using (var file = System.IO.File.Create(path))
{
ser.Serialize(file, cp);
}
using (var file = System.IO.File.OpenRead(path))
{
deserializedCp = (CompactPeptide)ser.Deserialize(file);
}
Assert.That(cp.Equals(deserializedCp));
}
