public List <CdaObservationModel> ExtractDataElements()
{
List <CdaObservationModel> returnList = new List <CdaObservationModel>();
if (this.Initialize())
{
if (this.documentType.Value == IheDocumentType.APE)
{
// Education Topic
List <POCD_MT000040Procedure> edItems = this.ExtractEducationProcedures();
if (edItems != null)
{
foreach (var edItem in edItems)
{
CdaSimpleObservation cdaObs = CdaObservationFactory.CreateObservation(edItem);
if ((cdaObs != null) && (cdaObs.Code != null))
{
CdaObservationModel tempObs = CdaObservationModel.Create(cdaObs);
returnList.Add(tempObs);
}
}
}
}
else if (this.documentType.Value == IheDocumentType.NDS)
{
returnList = this.ExtractBabyObservationsFromNds();
}
else
{
List <POCD_MT000040Observation> pocdObsList = this.ExtractObservations();
foreach (var pocdObs in pocdObsList)
{
// *** Create a simple observation ***
CdaSimpleObservation cdaObs;
cdaObs = CdaObservationFactory.CreateObservation(pocdObs);
// *** Convert to model + add to return ***
if ((cdaObs != null) && (cdaObs.Code != null))
{
CdaObservationModel tempObs = CdaObservationModel.Create(cdaObs);
returnList.Add(tempObs);
}
}
}
}
return(returnList);
}
public static AphpDocument CreateAphpDocument(CdaSource source)
{
// *** Creates the APHP document ***
AphpDocument aphp = new AphpDocument();
// *** Set id ***
Guid tempGuid = new Guid(source.DocumentId);
aphp.DocumentId = tempGuid.ToString();
// *** Create Record Target Section ***
aphp.RecordTarget = CdaSectionFactory.CreateRecordTarget(source.VprData.Demographics);
// *** Add provider organization to record target ***
aphp.RecordTarget.ProviderOrganization = CdaSectionFactory.CreateProviderOrganization(source.VprData.Demographics, source.ProviderOrganizationPhone);
// *** Create Device Author ***
// TODO: Skip device author...?
//aphp.DeviceAuthor = new CdaDeviceAuthor();
//aphp.DeviceAuthor.AssignedAuthoringDevice.ManufacturerModelName = source.ManufacturerModelName;
//aphp.DeviceAuthor.AssignedAuthoringDevice.SoftwareName = source.SoftwareName;
// *** Create Author ***
aphp.Author = CdaSectionFactory.CreateAuthor(source.VprData);
// *** Information Recipient ***
aphp.Recipient = new CdaRecipient();
aphp.Recipient.FirstName = source.Options.IntendedRecipientFirstName;
aphp.Recipient.LastName = source.Options.IntendedRecipientLastName;
aphp.Recipient.Organization = source.Options.IntendedRecipientOrganization;
// *** Participants ***
aphp.Participants = CdaSectionFactory.CreateParticipants(source.VprData);
// *** Custodian ***
aphp.Custodian = CdaSectionFactory.CreateCustodian(aphp.RecordTarget.ProviderOrganization);
// *** Documentation Of ***
aphp.DocumentationOf = CdaSectionFactory.CreateDocumentationOf();
// *** Chief Complaint ***
aphp.ChiefComplaint = CdaSectionFactory.CreateChiefComplaintSection(source.Observations);
// *** History of Present Illness ***
aphp.HistoryOfPresentIllness = CdaSectionFactory.CreatePresentIllnessSection(source.Observations);
// *** History of Past Illness ***
ValueSet vs;
if (source.ValueSets.TryGetValue(ValueSetType.HistoryOfPastIllness, out vs))
{
aphp.HistoryOfPastIllness = CdaSectionFactory.CreatePastIllnessSection(source.Observations, (HistoryOfPastIllnessValueSet)vs);
}
// *** Coded History of Infection ***
if (source.ValueSets.TryGetValue(ValueSetType.HistoryOfInfection, out vs))
{
aphp.CodedHistoryOfInfection = CdaSectionFactory.CreateHistoryOfInfectionSection(source.Observations, (HistoryOfInfectionValueSet)vs);
}
// *** Allergies ***
aphp.Allergies = CdaSectionFactory.CreateAllergiesSection(source.VprData.Reactions);
CdaAllergy latexAllergy = CdaObservationFactory.CreateLatexAllergy(source.Observations);
if (latexAllergy != null)
{
aphp.Allergies.Allergies.Add(latexAllergy);
}
// *** Pregnancy History ***
aphp.PregnancyHistorySection = CdaSectionFactory.CreatePregnancyHistorySection(source.Observations, source.Patient.Pregnant, source.Pregnancies);
// *** Coded Social History ***
aphp.SocialHistory = CdaSectionFactory.CreateSocialHistorySection(source.Observations);
// *** Coded Family Medical History ***
if (source.ValueSets.TryGetValue(ValueSetType.AntepartumFamilyHistory, out vs))
{
aphp.FamilyMedicalHistory = CdaSectionFactory.CreateFamilyHistorySection(source.Observations, vs);
}
// *** Review of Systems (+ Menstrual History) ***
if (source.ValueSets.TryGetValue(ValueSetType.MenstrualHistory, out vs))
{
aphp.ReviewOfSystems = CdaSectionFactory.CreateReviewOfSystemsSection(source.Observations, vs);
}
// *** Coded Physical Exam ***
aphp.PhysicalExam = CdaSectionFactory.CreatePhysicalExamSection(source.Observations);
aphp.PhysicalExam.VitalSigns = CdaSectionFactory.CreateVitalsSubSection(source.VprData);
return(aphp);
}
public static ApsDocument CreateApsDocument(CdaSource cdaSource)
{
// *** Creates the APS document ***
ApsDocument aps = new ApsDocument();
// *** Set id ***
Guid tempGuid = new Guid(cdaSource.DocumentId);
aps.DocumentId = tempGuid.ToString();
// *** Create Record Target Section ***
aps.RecordTarget = CdaSectionFactory.CreateRecordTarget(cdaSource.VprData.Demographics);
// *** Add provider organization to record target ***
aps.RecordTarget.ProviderOrganization = CdaSectionFactory.CreateProviderOrganization(cdaSource.VprData.Demographics, cdaSource.ProviderOrganizationPhone);
// *** Create Author ***
aps.Author = CdaSectionFactory.CreateAuthor(cdaSource.VprData);
// *** Information Recipient ***
aps.Recipient = new CdaRecipient();
aps.Recipient.FirstName = cdaSource.Options.IntendedRecipientFirstName;
aps.Recipient.LastName = cdaSource.Options.IntendedRecipientLastName;
aps.Recipient.Organization = cdaSource.Options.IntendedRecipientOrganization;
// *** Participants ***
//aphp.Participants = CreateParticipants(cdaSource.VprData);
// *** Custodian ***
aps.Custodian = CdaSectionFactory.CreateCustodian(aps.RecordTarget.ProviderOrganization);
// *** Documentation Of ***
aps.DocumentationOf = CdaSectionFactory.CreateDocumentationOf();
// *** Allergies ***
aps.Allergies = CdaSectionFactory.CreateAllergiesSection(cdaSource.VprData.Reactions);
CdaAllergy latexAllergy = CdaObservationFactory.CreateLatexAllergy(cdaSource.Observations);
if (latexAllergy != null)
{
aps.Allergies.Allergies.Add(latexAllergy);
}
// *** Advance Directves ***
aps.AdvanceDirectiveSection = CdaSectionFactory.CreateAdvanceDirectivesSection(cdaSource.Observations);
// *** Care Plan ***
aps.CarePlanSection = CdaSectionFactory.CreateApsCarePlanSection(cdaSource.Observations);
// *** Problems ***
aps.ProblemsSection = CdaSectionFactory.CreateProblemsSection(cdaSource.Observations, cdaSource.VprData.Problems);
// *** Meds ***
aps.MedicationsSection = CdaSectionFactory.CreateMedicationSection(cdaSource.VprData.Meds);
// *** EDD ***
aps.EstimatedDeliveryDatesSection = CdaSectionFactory.CreateEddSection(cdaSource.Observations);
// *** Antepartum Visit Summary ***
aps.AntepartumVisitSummarySection = CdaSectionFactory.CreateVisitSummarySection(cdaSource.Observations);
return(aps);
}
private List <CdaObservationModel> ExtractBabyObservationsFromNds()
{
// *** Extract section observations from the document ***
List <CdaObservationModel> returnList = new List <CdaObservationModel>();
int babyNumber = 0;
if (this.Initialize())
{
// *** Check if we have something to work with ***
if (this.PocdDocument != null)
{
if (this.PocdDocument.component != null)
{
if (this.PocdDocument.component.Item is POCD_MT000040StructuredBody)
{
POCD_MT000040StructuredBody body = this.PocdDocument.component.Item as POCD_MT000040StructuredBody;
if (body.component != null)
{
if (body.component.Length > 0)
{
foreach (var item in body.component)
{
if (item.section != null)
{
if (item.section.code != null)
{
if (item.section.code.code == "57075-4")
{
if (item.section.component != null)
{
foreach (var comp in item.section.component)
{
if (comp.section != null)
{
if (comp.section.code.code == "10210-3")
{
if (comp.section.entry != null)
{
++babyNumber;
List <POCD_MT000040Observation> pocdList = new List <POCD_MT000040Observation>();
foreach (var entry in comp.section.entry)
{
if (entry.Item != null)
{
if (entry.Item is POCD_MT000040Observation)
{
POCD_MT000040Observation pocdObs = entry.Item as POCD_MT000040Observation;
pocdList.Add(pocdObs);
List <POCD_MT000040Observation> tempList = this.GetSupportingObservationsFromSection(pocdObs);
pocdList.AddRange(tempList);
}
}
}
foreach (var pocdObs in pocdList)
{
// *** Create a simple observation ***
CdaSimpleObservation cdaObs = CdaObservationFactory.CreateObservation(pocdObs);
// *** Convert to model + add to return ***
if ((cdaObs != null) && (cdaObs.Code != null))
{
CdaObservationModel tempObs = CdaObservationModel.Create(cdaObs);
tempObs.BabyNumber = babyNumber;
returnList.Add(tempObs);
}
}
}
}
}
}
}
}
}
}
}
}
}
}
}
}
}
return(returnList);
}
