public void TestMethod1()
{
C19M.D.Gumel2006.Interfaces.ITable1 Table1 = new C19M.D.Gumel2006.Classes.Table1();
// Use StartDate, EndDate,and NumberDaysAfterStartDate from Gumel et al. (2004)
FhirDateTime startDate = new FhirDateTime(new DateTimeOffset(new DateTime(2003, 2, 23)));
FhirDateTime endDate = new FhirDateTime(new DateTimeOffset(new DateTime(2003, 9, 1)));
Func <FhirDateTime, PositiveInt> numberDaysAfterStartDate =
(x) =>
{
if (x.ToPartialDateTime().Value.ToUniversalTime().DateTime.Date >= startDate.ToPartialDateTime().Value.ToUniversalTime().DateTime.Date)
{
return(new PositiveInt((int)Math.Abs(Math.Round((x.ToPartialDateTime().Value.ToUniversalTime().DateTime.Date - startDate.ToPartialDateTime().Value.ToUniversalTime().DateTime.Date).TotalDays))));
}
else
{
return(new PositiveInt(0));
}
};
// Context
C19M.M.C.A.Gumel2006.Interfaces.Contexts.IGumel2006_Context context = new C19M.M.C.A.Gumel2006.Classes.Contexts.Gumel2006_Context(
endDate,
numberDaysAfterStartDate,
startDate,
Table1.DiseaseInducedMortalityRate,
new Hl7.Fhir.Model.FhirDecimal(0), // TODO: Change
new Hl7.Fhir.Model.FhirDecimal(10), // TODO: Change
new Hl7.Fhir.Model.FhirDecimal(0), // TODO: Change
new Hl7.Fhir.Model.FhirDecimal(4000000), // TODO: Change
new Hl7.Fhir.Model.FhirDecimal(0), // TODO: Change
Table1.DevelopmentClinicalSymptomsRate,
Table1.EffectiveContactRate,
Table1.RecoveryRate,
Table1.NaturalMortalityRate,
Table1.VaccinationCoverageRate,
Table1.RecruitmentRateSusceptibleHumans,
Table1.VaccineEfficacy);
// Export
C19M.M.C.A.Gumel2006.Interfaces.Exports.IDiseaseTransmission_Export export = new C19M.M.C.A.Gumel2006.Classes.Exports.DiseaseTransmission_Export(
context);
export.Solve();
var I = export.DayInfectedIndividuals;
var S = export.DaySusceptibleIndividuals;
var dayCumulativeDiseaseInducedDeaths = export.DayCumulativeDiseaseInducedDeaths;
foreach (var item in I)
{
System.Diagnostics.Debug.WriteLine(
item.Item2.Value.Value);
}
}
public Figure6_DiseaseTransmission()
{
C19M.D.Gumel2006.Interfaces.IFigure6 Figure6 = new C19M.D.Gumel2006.Classes.Figure6();
// Use StartDate, EndDate,and NumberDaysAfterStartDate from Gumel et al. (2004)
FhirDateTime startDate = new FhirDateTime(new DateTimeOffset(new DateTime(2003, 2, 23)));
FhirDateTime endDate = new FhirDateTime(new DateTimeOffset(new DateTime(2003, 2, 23).AddDays(1200)));
Func <FhirDateTime, PositiveInt> numberDaysAfterStartDate =
(x) =>
{
if (x.ToDateTimeOffset(TimeSpan.Zero).UtcDateTime.Date >= startDate.ToDateTimeOffset(TimeSpan.Zero).UtcDateTime.Date)
{
return(new PositiveInt((int)Math.Abs(Math.Round((x.ToDateTimeOffset(TimeSpan.Zero).UtcDateTime.Date - startDate.ToDateTimeOffset(TimeSpan.Zero).UtcDateTime.Date).TotalDays))));
}
else
{
return(new PositiveInt(0));
}
};
// Context
C19M.M.C.A.Gumel2006.Interfaces.Contexts.IGumel2006_Context context = new C19M.M.C.A.Gumel2006.Classes.Contexts.Gumel2006_Context(
endDate,
numberDaysAfterStartDate,
startDate,
Figure6.DiseaseInducedMortalityRate,
new Hl7.Fhir.Model.FhirDecimal(0), // TODO: Change
new Hl7.Fhir.Model.FhirDecimal(10), // TODO: Change
new Hl7.Fhir.Model.FhirDecimal(0), // TODO: Change
new Hl7.Fhir.Model.FhirDecimal(4000000), // TODO: Change
new Hl7.Fhir.Model.FhirDecimal(0), // TODO: Change
Figure6.DevelopmentClinicalSymptomsRate,
Figure6.EffectiveContactRate,
Figure6.RecoveryRate,
Figure6.NaturalMortalityRate,
Figure6.VaccinationCoverageRate,
Figure6.RecruitmentRateSusceptibleHumans,
Figure6.VaccineEfficacy);
// Export
C19M.M.C.A.Gumel2006.Interfaces.Exports.IDiseaseTransmission_Export export = new C19M.M.C.A.Gumel2006.Classes.Exports.DiseaseTransmission_Export(
context);
export.Solve();
this.DayCumulativeDiseaseInducedDeaths = export.DayCumulativeDiseaseInducedDeaths;
this.DayCumulativeProbableCases = export.DayCumulativeProbableCases;
this.DayDiseaseInducedDeaths = export.DayDiseaseInducedDeaths;
this.DayProbableCases = export.DayProbableCases;
this.DayLatentIndividuals = export.DayLatentIndividuals;
this.DayInfectedIndividuals = export.DayInfectedIndividuals;
this.DayTreatedIndividuals = export.DayTreatedIndividuals;
this.DaySusceptibleIndividuals = export.DaySusceptibleIndividuals;
this.DayVaccinatedIndividuals = export.DayVaccinatedIndividuals;
}
