public void bruker12T_GetNumSpectraTest1()
{
BrukerV2Run run = new BrukerV2Run(FileRefs.RawDataMSFiles.BrukerSolarix12TFile1);
Assert.AreEqual(8, run.GetNumMSScans());
Assert.AreEqual(8, run.MaxScan);
}
public void bruker12T_FID_file_checkDatasetNames_andPaths()
{
BrukerV2Run run = new BrukerV2Run(FileRefs.RawDataMSFiles.BrukerSolarix12T_FID_File1);
Assert.AreEqual("HVY_000001", run.DatasetName);
Assert.AreEqual(@"\\protoapps\UserData\Slysz\DeconTools_TestFiles\Bruker\Bruker_Solarix12T\HVY_000001", run.Filename);
}
public void bruker12T_GetMassSpectrumTest1()
{
BrukerV2Run run = new BrukerV2Run(FileRefs.RawDataMSFiles.BrukerSolarix12TFile1);
ScanSet scanset = new ScanSet(4);
run.GetMassSpectrum(scanset, 0, 50000);
//run.XYData.Display();
}
public void bruker15T_checkDataSetNames_andPaths()
{
BrukerV2Run run = new BrukerV2Run(FileRefs.RawDataMSFiles.Bruker15TFile1);
Assert.AreEqual("092410_ubiquitin_AutoCID_000004", run.DatasetName);
Assert.AreEqual(FileRefs.RawDataBasePath + @"\Bruker\Bruker_15T\092410_ubiquitin_AutoCID_000004", run.DataSetPath);
Assert.AreEqual(FileRefs.RawDataBasePath + @"\Bruker\Bruker_15T\092410_ubiquitin_AutoCID_000004", run.Filename);
Assert.AreEqual(FileRefs.RawDataBasePath + @"\Bruker\Bruker_15T\092410_ubiquitin_AutoCID_000004\092410_ubiquitin_AutoCID_000004.d\ser", run.RawData.FileName);
}
public void bruker12T_checkDataSetNames_andPaths()
{
BrukerV2Run run = new BrukerV2Run(FileRefs.RawDataMSFiles.BrukerSolarix12TFile1);
Assert.AreEqual("12Ttest_000003", run.DatasetName);
Assert.AreEqual(FileRefs.RawDataBasePath + @"\Bruker\Bruker_Solarix12T\12Ttest_000003", run.DataSetPath);
Assert.AreEqual(@"\\protoapps\UserData\Slysz\DeconTools_TestFiles\Bruker\Bruker_Solarix12T\12Ttest_000003", run.Filename);
Assert.AreEqual(@"\\protoapps\UserData\Slysz\DeconTools_TestFiles\Bruker\Bruker_Solarix12T\12Ttest_000003\ser", run.RawData.FileName);
}
public void bruker15T_GetMassSpectrumTest1()
{
BrukerV2Run run = new BrukerV2Run(FileRefs.RawDataMSFiles.Bruker15TFile1);
ScanSet scanset = new ScanSet(4);
run.GetMassSpectrum(scanset, 0, 50000);
Assert.AreEqual(789.967903595286m, (decimal)run.XYData.Xvalues[129658]);
Assert.AreEqual(9503829, run.XYData.Yvalues[129658]);
}
public void settingsTest1()
{
using (BrukerV2Run run = new BrukerV2Run(FileRefs.RawDataMSFiles.BrukerSolarix12TFile1))
{
Assert.AreEqual(184346289.692624m, (decimal)run.CalibrationData.ML1);
Assert.AreEqual(12.8161378555916m, (decimal)run.CalibrationData.ML2);
Assert.AreEqual(833333.333333334m, (decimal)run.CalibrationData.SW_h);
Assert.AreEqual(524288, run.CalibrationData.TD);
Assert.AreEqual(0m, (decimal)run.CalibrationData.FR_Low);
Assert.AreEqual(0, run.CalibrationData.ByteOrder);
}
}
public void bruker12T_FID_GetSpectrumTest2()
{
BrukerV2Run run = new BrukerV2Run(FileRefs.RawDataMSFiles.BrukerSolarix12T_FID_File2);
Assert.AreEqual(1, run.MinScan);
Assert.AreEqual(1, run.MaxScan);
ScanSet scanset = new ScanSet(1);
run.GetMassSpectrum(scanset, 0, 100000);
Assert.AreEqual(369657, run.XYData.Xvalues.Length);
//run.XYData.Display();
}
