/*
* Finds the list of peptides that match the query mass, within the
* ppmTolerance. If any of these peptides are excluded in the specified time,
* this function will return true.
*/
public bool isExcluded(double queryMass)
{
List <Peptide> matchedMassesPeptides = BinarySearchUtil.findPeptides(exclusionList, queryMass, ppmTolerance);
foreach (Peptide p in matchedMassesPeptides)
{
if (p.isExcluded(currentTime))
{
return(true);
}
}
return(false);
}
public List <Peptide> findPeptides(double queryMass, double ppmTolerance)
{
return(BinarySearchUtil.findPeptides(peptides, queryMass, ppmTolerance));
}