// Start is called before the first frame update
void Start()
{
n = Model.GetInstance().GetNumCells(0);
iterations = BacteriaFactory.GetIterations();
CellDoneHandler.Setup(n);
StartCoroutine(Load());
ExportHandler.init();
}
private static String CreateDirPath()
{
BacteriaFactory b = BacteriaFactory.GetInstance();
Model m = Model.GetInstance();
String enviroMode = m.environment.IsDynamic() ? "Dynamic": "Static";
String death = b.GetLifeRegulator() is LifeRegulator ? "Death" : "Immortal";
return(Application.dataPath + "/Exports/" + b.GetRegulatorType().ToString() + "_" + death + "_" + m.GetNumCells(0) + "_" +
enviroMode + "_" + BacteriaFactory.GetIterations() + "_" + timeStamp + "/");
}
public void OnEndSimClick() //called when the user clicks the end sim button to open the stat page
{
endSimButton.gameObject.SetActive(false);
endSimScreen.gameObject.SetActive(true);
prevTimeScaleFactor = model.GetTimeScaleFactor();
model.SetTimeScaleFactor(0);
//Update the texts for the end screen
numOfCells.text = "Number of Bacteria: " + model.GetCells().Count;
numOfIterations.text = "Number of Iterations: " + BacteriaFactory.GetIterations();
timeElapsed.text = "Time elapsed: " + FormatTimeString();
}
//Calculates the average ligand consentration for each time step
private float[] CalculateAverageLigandC()
{
if (allCells.Count == 0)
{
return(null);
}
float[] averageLigandC = new float[BacteriaFactory.GetIterations()];
for (int i = 0; i < averageLigandC.Length; i++) //for each iteration
{
float averageC = 0;
for (int j = 0; j < cells[i + 1].Count; j++) //for the cells present in that iteration
{
averageC += (float)((ForwardInternals)cells[i + 1][j].GetInternals()).GetInternalStates()[i + 1].l;
}
averageLigandC[i] = (cells[i + 1].Count != 0 ? averageC / cells[i + 1].Count : 0);
}
return(averageLigandC);
}
public void Run()
{
Model model = Model.GetInstance();
for (int k = 0; k < runs; k++) //simulates m different runs only showing the last one but exporting the data for the rest
{
if (k != 0)
{ //reset data if not the first run (since that is already setup elsewhere in the code)
model.SetupCells(n, iterations);
model.CreateCells(n);
}
for (simulatedStep = 1; simulatedStep <= iterations; simulatedStep++) //Simulate the cells one timestep at a time
{
model.SimulateTimeStep(simulatedStep);
}
model.ExportData(n, BacteriaFactory.GetIterations());
}
model.GetAverageLigandC();
}
