private void _btnLoadAnnotations_Click(object sender, EventArgs e)
{
using (OpenFileDialog openFileDialog = new OpenFileDialog())
{
openFileDialog.Filter = "Annotations File (.xml)|*.xml";
if (openFileDialog.ShowDialog(this) == DialogResult.OK)
{
AnnContainer tmpContainer = null;
try
{
AnnCodecs codecs = new AnnCodecs();
tmpContainer = codecs.Load(openFileDialog.FileName, 1);
AnnContainer activeContainer = _automation.Container;
if (activeContainer != null)
{
activeContainer.Children.Clear();
if (tmpContainer != null)
{
foreach (AnnObject annObject in tmpContainer.Children)
{
activeContainer.Children.Add(annObject);
}
}
}
_automation.Invalidate(LeadRectD.Empty);
}
catch
{
Messager.ShowError(this, "Invalid Annotation File");
}
}
}
}
private void _miLoad_Click(object sender, EventArgs e)
{
AnnContainer container = _automation.Container;
AnnCodecs codecs = new AnnCodecs();
using (OpenFileDialog openFileDialog = new OpenFileDialog())
{
openFileDialog.Filter = "Annotations File|*.xml";
if (openFileDialog.ShowDialog(this) == DialogResult.OK)
{
AnnContainer tmpContainer = null;
try
{
tmpContainer = codecs.Load(openFileDialog.FileName, 1);
}
catch
{
Messager.ShowError(this, "Invalid Annotation File");
}
if (tmpContainer != null)
{
_automation.SelectLayer(null);
container.Children.Clear();
container.Layers.Clear();
container.SelectionObject.SelectedObjects.Clear();
foreach (AnnObject annObject in tmpContainer.Children)
{
container.Children.Add(annObject);
}
AnnLayerCollection tmpLayers = tmpContainer.Layers;
AnnLayerCollection containerLayers = _containerNode.Layer.Layers;
containerLayers.Clear();
foreach (AnnLayer layer in tmpLayers)
{
container.Layers.Add(layer);
}
_tvLayers.BeginUpdate();
_tvLayers.Nodes.Clear();
_containerNode.Nodes.Clear();
_tvLayers.Nodes.Add(_containerNode);
AddLayersNodes(container.Layers, _containerNode);
_tvLayers.EndUpdate();
_automation.Invalidate(LeadRectD.Empty);
}
}
}
}
public static DicomDataSet GeneratePresentationState(string seriesInstanceUID, string annotationData, string description, DicomDataSet seriesDs, int windowCenter, int windowWidth, out string sopInstanceUID)
{
AnnCodecs codec = new AnnCodecs();
using (MemoryStream ms = new MemoryStream(Encoding.UTF8.GetBytes(annotationData)))
{
ms.Position = 0;
AnnCodecsInfo codecInfo = codec.GetInfo(ms);
ms.Position = 0;
JavaScriptSerializer jsSerialzer = new JavaScriptSerializer();
DicomAnnotationsUtilities dicomAnnotationsUtilities = new DicomAnnotationsUtilities();
DicomDataSet ds = new DicomDataSet();
sopInstanceUID = SeriesGenerator.GenerateDicomUniqueIdentifier();
//Patient Module C.7.1.1
ds.InsertElementAndSetValue(DicomTag.PatientName, seriesDs.GetValue <string>(DicomTag.PatientName, string.Empty));
ds.InsertElementAndSetValue(DicomTag.PatientID, seriesDs.GetValue <string>(DicomTag.PatientID, string.Empty));
ds.InsertElementAndSetValue(DicomTag.PatientBirthDate, "");
ds.InsertElementAndSetValue(DicomTag.PatientSex, "");
//Study Module C.7.2.1
ds.InsertElementAndSetValue(DicomTag.StudyInstanceUID, seriesDs.GetValue <string>(DicomTag.StudyInstanceUID, string.Empty));
ds.InsertElementAndSetValue(DicomTag.StudyDate, "");
ds.InsertElementAndSetValue(DicomTag.StudyTime, "");
ds.InsertElementAndSetValue(DicomTag.ReferringPhysicianName, "");
ds.InsertElementAndSetValue(DicomTag.StudyID, seriesDs.GetValue <string>(DicomTag.StudyID, string.Empty));
ds.InsertElementAndSetValue(DicomTag.AccessionNumber, seriesDs.GetValue <string>(DicomTag.AccessionNumber, string.Empty));
//Series Module C.7.3.1
ds.InsertElementAndSetValue(DicomTag.SeriesInstanceUID, SeriesGenerator.GenerateDicomUniqueIdentifier());
ds.InsertElementAndSetValue(DicomTag.Modality, "PR");
ds.InsertElementAndSetValue(DicomTag.SeriesNumber, 1);
ds.InsertElementAndSetValue(DicomTag.SeriesDate, DicomDateValue.Now);
ds.InsertElementAndSetValue(DicomTag.SeriesTime, DicomTimeValue.Now);
ds.InsertElementAndSetValue(DicomTag.SeriesDescription, "Study layout presentation state");
//General Equipment Module C.7.5.1
ds.InsertElementAndSetValue(DicomTag.Manufacturer, "LEADTOOLS IMAGING");
ds.InsertElementAndSetValue(DicomTag.InstitutionName, "LEADTOOLS, INC.");
ds.InsertElementAndSetValue(DicomTag.StationName, "HTML5 Viewer");
//Presentation State Identification Module C.11.10
ds.InsertElementAndSetValue(DicomTag.PresentationCreationDate, DicomDateValue.Now);
ds.InsertElementAndSetValue(DicomTag.PresentationCreationTime, DicomTimeValue.Now);
//Content Identification Macro Table 10-12
ds.InsertElementAndSetValue(DicomTag.InstanceNumber, 1);
ds.InsertElementAndSetValue(DicomTag.ContentLabel, "STUDY LAYOUT PRESENTATION");
ds.InsertElementAndSetValue(DicomTag.ContentDescription, description);
//ds.InsertElementAndSetValue(DicomTag.ContentCreatorName, userName);
//Presentation State RelationShip Module C11.11
PresentationStateRelationShip referncedSeriesSeq = new PresentationStateRelationShip();
referncedSeriesSeq.ReferencedSeriesSequence = new List <ReferencedSeries>();
ReferencedSeries referencedSeries = new ReferencedSeries();
referencedSeries.SeriesInstanceUID = seriesInstanceUID;
referencedSeries.ReferencedImageSequence = new List <SopInstanceReference>();
referncedSeriesSeq.ReferencedSeriesSequence.Add(referencedSeries);
Dictionary <LeadSize, List <ImageSopInstanceReference> > displayedAreaInstance = new Dictionary <LeadSize, List <ImageSopInstanceReference> >();
for (int index = 0; index < codecInfo.Pages.Length; index++)
{
AnnContainer container = codec.Load(ms, codecInfo.Pages[index]);
ms.Position = 0;
if (null == container.UserData)
{
continue;
}
AnnUserData refInstance = (AnnUserData)jsSerialzer.Deserialize <AnnUserData>(container.UserData.ToString());
if (null != refInstance && null != refInstance.ReferencedImageSequence)
{
referncedSeriesSeq.ReferencedSeriesSequence[0].ReferencedImageSequence.Add(refInstance.ReferencedImageSequence);
// The Medical Viewer defaults dpi to 150
// In this case, there is enough information to compute the dpi, which should be 150
//double dpiX = 0;
//double dpiY = 0;
//container.CalculateDpi(out dpiX, out dpiY);
//if (dpiX == 0 || dpiY == 0)
//{
// dpiX = 150.0;
// dpiY = 150.0;
//}
double xDpi = 150;
double yDpi = 150;
dicomAnnotationsUtilities.ImageDpiX = xDpi;
dicomAnnotationsUtilities.ImageDpiY = yDpi;
DicomElement graphicSequenceItem = dicomAnnotationsUtilities.FromAnnContainerToDataSet(ds, container);
DicomElement layerElement = ds.FindFirstElement(graphicSequenceItem, DicomTag.GraphicLayer, false);
if (null == layerElement)
{
ds.InsertElementAndSetValue(graphicSequenceItem, true, DicomTag.GraphicLayer, "LAYER1");
}
else
{
ds.SetStringValue(layerElement, "LAYER1", DicomCharacterSetType.Default);
}
GraphicAnnotationsModule annModule = new GraphicAnnotationsModule();
annModule.ReferencedImageSequence = new List <ImageSopInstanceReference>();
annModule.ReferencedImageSequence.Add(refInstance.ReferencedImageSequence);
ds.Set(graphicSequenceItem, annModule);
}
if (!refInstance.ImageSize.IsEmpty)
{
if (!displayedAreaInstance.ContainsKey(refInstance.ImageSize))
{
displayedAreaInstance[refInstance.ImageSize] = new List <ImageSopInstanceReference>();
}
displayedAreaInstance[refInstance.ImageSize].Add(refInstance.ReferencedImageSequence);
}
}
ds.Set(referncedSeriesSeq);
//Displayed Area Module
//
//
DisplayedAreaModule displayedAreaModule = new DisplayedAreaModule();
displayedAreaModule.DisplayedAreaSelection = new List <DisplayedAreaSelection>();
foreach (KeyValuePair <LeadSize, List <ImageSopInstanceReference> > areaInstance in displayedAreaInstance)
{
DisplayedAreaSelection displayedArea = new DisplayedAreaSelection();
displayedAreaModule.DisplayedAreaSelection.Add(displayedArea);
displayedArea.DisplayedAreaTopLeftHandCorner = new List <long>();
displayedArea.DisplayedAreaBottomRightHandCorner = new List <long>();
displayedArea.DisplayedAreaTopLeftHandCorner.Add(1);
displayedArea.DisplayedAreaTopLeftHandCorner.Add(1);
displayedArea.DisplayedAreaBottomRightHandCorner.Add(areaInstance.Key.Width);
displayedArea.DisplayedAreaBottomRightHandCorner.Add(areaInstance.Key.Height);
displayedArea.PresentationSizeMode = PresentationSizeMode.ScaleToFit;
displayedArea.PresentationPixelAspectRatio = new List <int>();
displayedArea.PresentationPixelAspectRatio.Add(1);
displayedArea.PresentationPixelAspectRatio.Add(1);
if (displayedAreaInstance.Count > 1)
{
displayedArea.ReferencedImageSequence = areaInstance.Value;
}
}
ds.Set(displayedAreaModule);
//Graphic Layer Module
GraphicLayerModule graphicLayerModule = new GraphicLayerModule();
GraphicLayer layer = new GraphicLayer();
graphicLayerModule.GraphicLayerSequence = new List <GraphicLayer>();
layer.GraphicLayerName = "LAYER1";
layer.GraphicLayerOrder = 1;
graphicLayerModule.GraphicLayerSequence.Add(layer);
ds.Set(graphicLayerModule);
//Softcopy Presentation LUT Module
SoftCopyPresentationLutModule presentationLut = new SoftCopyPresentationLutModule();
presentationLut.PresentationLutShape = PresentationLutShape.Identity;
if (windowCenter != -1 || windowWidth != -1)
{
SoftCopyVoiLutModule module = new SoftCopyVoiLutModule();
module.WindowCenter = new List <double>();
module.WindowCenter.Add(windowCenter);
module.WindowWidth = new List <double>();
module.WindowWidth.Add(windowWidth);
ds.Set(module);
}
ds.Set(presentationLut);
//SOP Common Module
ds.InsertElementAndSetValue(DicomTag.SOPClassUID, DicomUidType.GrayscaleSoftcopyPresentationStateStorage);
ds.InsertElementAndSetValue(DicomTag.SOPInstanceUID, sopInstanceUID);
ds.InsertElementAndSetValue(DicomTag.InstanceCreationDate, DicomDateValue.Now);
ds.InsertElementAndSetValue(DicomTag.InstanceCreationTime, DicomDateValue.Now);
ds.InsertElementAndSetValue(DicomTag.InstanceNumber, 1);
return(ds);
}
}
public static DicomDataSet GeneratePresentationStateForAnnotations
(
string userName,
string seriesInstanceUID,
string annotationData,
string description,
string userData,
DataSet seriesDs
)
{
AnnCodecs codec = new AnnCodecs();
using (MemoryStream ms = new MemoryStream(Encoding.UTF8.GetBytes(annotationData)))
{
ms.Position = 0;
AnnCodecsInfo codecInfo = codec.GetInfo(ms);
ms.Position = 0;
JavaScriptSerializer jsSerialzer = new JavaScriptSerializer();
DicomAnnotationsUtilities dicomAnnotationsUtilities = new DicomAnnotationsUtilities();
if (null == seriesDs || seriesDs.Tables[DataTableHelper.PatientTableName].Rows.Count == 0 || seriesDs.Tables[DataTableHelper.StudyTableName].Rows.Count == 0)
{
throw new Exception("Series not found");
}
DicomDataSet ds = new DicomDataSet();
{
DataRow patient = seriesDs.Tables[DataTableHelper.PatientTableName].Rows[0];
DataRow study = seriesDs.Tables[DataTableHelper.StudyTableName].Rows[0];
IPatientInfo patientInfo = RegisteredDataRows.PatientInfo;
PersonNameComponent pn = patientInfo.Name(patient);
string sFamilyName = pn.FamilyName;
string sGivenName = pn.GivenName;
string sMiddleName = pn.MiddleName;
string sNamePrefix = pn.NamePrefix;
string sNameSuffix = pn.NameSuffix;
string sPatientId = patientInfo.GetElementValue(patient, DicomTag.PatientID);
//Patient Module C.7.1.1
ds.InsertElementAndSetValue(DicomTag.PatientName, string.Format("{0}^{1}^{2}^{3}^{4}",
string.IsNullOrEmpty(sFamilyName) ? "" : sFamilyName,
string.IsNullOrEmpty(sGivenName) ? "" : sGivenName,
string.IsNullOrEmpty(sMiddleName) ? "" : sMiddleName,
string.IsNullOrEmpty(sNamePrefix) ? "" : sNamePrefix,
string.IsNullOrEmpty(sNameSuffix) ? "" : sNameSuffix));
ds.InsertElementAndSetValue(DicomTag.PatientID, sPatientId);
ds.InsertElementAndSetValue(DicomTag.PatientBirthDate, "");
ds.InsertElementAndSetValue(DicomTag.PatientSex, "");
IStudyInfo studyInfo = RegisteredDataRows.StudyInfo;
string sStudyInstanceUid = studyInfo.GetElementValue(study, DicomTag.StudyInstanceUID);
string sAccessionNumber = studyInfo.GetElementValue(study, DicomTag.AccessionNumber);
string sStudyId = studyInfo.GetElementValue(study, DicomTag.StudyID);
//Study Module C.7.2.1
ds.InsertElementAndSetValue(DicomTag.StudyInstanceUID, sStudyInstanceUid);
ds.InsertElementAndSetValue(DicomTag.StudyDate, "");
ds.InsertElementAndSetValue(DicomTag.StudyTime, "");
ds.InsertElementAndSetValue(DicomTag.ReferringPhysicianName, "");
ds.InsertElementAndSetValue(DicomTag.StudyID, string.IsNullOrEmpty(sStudyId) ? "" : sStudyId);
ds.InsertElementAndSetValue(DicomTag.AccessionNumber, string.IsNullOrEmpty(sAccessionNumber) ? "" : sAccessionNumber);
//Series Module C.7.3.1
ds.InsertElementAndSetValue(DicomTag.SeriesInstanceUID, SeriesGenerator.GenerateDicomUniqueIdentifier());
ds.InsertElementAndSetValue(DicomTag.Modality, "PR");
ds.InsertElementAndSetValue(DicomTag.SeriesNumber, 1);
ds.InsertElementAndSetValue(DicomTag.SeriesDate, DicomDateValue.Now);
ds.InsertElementAndSetValue(DicomTag.SeriesTime, DicomTimeValue.Now);
ds.InsertElementAndSetValue(DicomTag.SeriesDescription, "Annotations presentation state");
//General Equipment Module C.7.5.1
ds.InsertElementAndSetValue(DicomTag.Manufacturer, "LEADTOOLS IMAGING");
ds.InsertElementAndSetValue(DicomTag.InstitutionName, "LEADTOOLS, INC.");
ds.InsertElementAndSetValue(DicomTag.StationName, "HTML5 Viewer");
//Presentation State Identification Module C.11.10
ds.InsertElementAndSetValue(DicomTag.PresentationCreationDate, DicomDateValue.Now);
ds.InsertElementAndSetValue(DicomTag.PresentationCreationTime, DicomTimeValue.Now);
//Content Identification Macro Table 10-12
ds.InsertElementAndSetValue(DicomTag.InstanceNumber, 1);
ds.InsertElementAndSetValue(DicomTag.ContentLabel, "ANNOTATIONS");
ds.InsertElementAndSetValue(DicomTag.ContentDescription, description);
ds.InsertElementAndSetValue(DicomTag.ContentCreatorName, userName);
//Presentation State RelationShip Module C11.11
PresentationStateRelationShip referncedSeriesSeq = new PresentationStateRelationShip();
referncedSeriesSeq.ReferencedSeriesSequence = new List <ReferencedSeries>();
ReferencedSeries referencedSeries = new ReferencedSeries();
referencedSeries.SeriesInstanceUID = seriesInstanceUID;
referencedSeries.ReferencedImageSequence = new List <SopInstanceReference>();
referncedSeriesSeq.ReferencedSeriesSequence.Add(referencedSeries);
Dictionary <LeadSize, List <ImageSopInstanceReference> > displayedAreaInstance = new Dictionary <LeadSize, List <ImageSopInstanceReference> >();
for (int index = 0; index < codecInfo.Pages.Length; index++)
{
AnnContainer container = codec.Load(ms, codecInfo.Pages[index]);
ms.Position = 0;
if (null == container.UserData)
{
continue;
}
AnnUserData refInstance = (AnnUserData)jsSerialzer.Deserialize <AnnUserData>(container.UserData.ToString());
if (null != refInstance && null != refInstance.ReferencedImageSequence)
{
referncedSeriesSeq.ReferencedSeriesSequence[0].ReferencedImageSequence.Add(refInstance.ReferencedImageSequence);
// The Medical Viewer defaults dpi to 150
// In this case, there is enough information to compute the dpi, which should be 150
//double dpiX = 0;
//double dpiY = 0;
//container.CalculateDpi(out dpiX, out dpiY);
//if (dpiX == 0 || dpiY == 0)
//{
// dpiX = 150.0;
// dpiY = 150.0;
//}
double xDpi = 150;
double yDpi = 150;
dicomAnnotationsUtilities.ImageDpiX = xDpi;
dicomAnnotationsUtilities.ImageDpiY = yDpi;
DicomElement graphicSequenceItem = dicomAnnotationsUtilities.FromAnnContainerToDataSet(ds, container);
DicomElement layerElement = ds.FindFirstElement(graphicSequenceItem, DicomTag.GraphicLayer, false);
if (null == layerElement)
{
ds.InsertElementAndSetValue(graphicSequenceItem, true, DicomTag.GraphicLayer, "LAYER1");
}
else
{
ds.SetStringValue(layerElement, "LAYER1", DicomCharacterSetType.Default);
}
GraphicAnnotationsModule annModule = new GraphicAnnotationsModule();
annModule.ReferencedImageSequence = new List <ImageSopInstanceReference>();
annModule.ReferencedImageSequence.Add(refInstance.ReferencedImageSequence);
ds.Set(graphicSequenceItem, annModule);
}
if (!refInstance.ImageSize.IsEmpty)
{
if (!displayedAreaInstance.ContainsKey(refInstance.ImageSize))
{
displayedAreaInstance[refInstance.ImageSize] = new List <ImageSopInstanceReference>();
}
displayedAreaInstance[refInstance.ImageSize].Add(refInstance.ReferencedImageSequence);
}
}
ds.Set(referncedSeriesSeq);
//Displayed Area Module
//
//
DisplayedAreaModule displayedAreaModule = new DisplayedAreaModule();
displayedAreaModule.DisplayedAreaSelection = new List <DisplayedAreaSelection>();
foreach (KeyValuePair <LeadSize, List <ImageSopInstanceReference> > areaInstance in displayedAreaInstance)
{
DisplayedAreaSelection displayedArea = new DisplayedAreaSelection();
displayedAreaModule.DisplayedAreaSelection.Add(displayedArea);
displayedArea.DisplayedAreaTopLeftHandCorner = new List <long>();
displayedArea.DisplayedAreaBottomRightHandCorner = new List <long>();
displayedArea.DisplayedAreaTopLeftHandCorner.Add(1);
displayedArea.DisplayedAreaTopLeftHandCorner.Add(1);
displayedArea.DisplayedAreaBottomRightHandCorner.Add(areaInstance.Key.Width);
displayedArea.DisplayedAreaBottomRightHandCorner.Add(areaInstance.Key.Height);
displayedArea.PresentationSizeMode = PresentationSizeMode.ScaleToFit;
displayedArea.PresentationPixelAspectRatio = new List <int>();
displayedArea.PresentationPixelAspectRatio.Add(1);
displayedArea.PresentationPixelAspectRatio.Add(1);
if (displayedAreaInstance.Count > 1)
{
displayedArea.ReferencedImageSequence = areaInstance.Value;
}
}
ds.Set(displayedAreaModule);
//Graphic Layer Module
GraphicLayerModule graphicLayerModule = new GraphicLayerModule();
graphicLayerModule.GraphicLayerSequence = new List <GraphicLayer>();
GraphicLayer layer = new GraphicLayer();
layer.GraphicLayerName = "LAYER1";
layer.GraphicLayerOrder = 1;
graphicLayerModule.GraphicLayerSequence.Add(layer);
ds.Set(graphicLayerModule);
//Softcopy Presentation LUT Module
SoftCopyPresentationLutModule presentationLut = new SoftCopyPresentationLutModule();
presentationLut.PresentationLutShape = PresentationLutShape.Identity;
ds.Set(presentationLut);
//SOP Common Module
ds.InsertElementAndSetValue(DicomTag.SOPClassUID, DicomUidType.GrayscaleSoftcopyPresentationStateStorage);
ds.InsertElementAndSetValue(DicomTag.SOPInstanceUID, SeriesGenerator.GenerateDicomUniqueIdentifier());
ds.InsertElementAndSetValue(DicomTag.InstanceCreationDate, DicomDateValue.Now);
ds.InsertElementAndSetValue(DicomTag.InstanceCreationTime, DicomDateValue.Now);
ds.InsertElementAndSetValue(DicomTag.InstanceNumber, 1);
}
return(ds);
}
}