/// <summary>
/// Load the wiff file's content.
/// </summary>
/// <returns>A <see cref="bool"/> value indicating the success of the loading.</returns>
public bool LoadContent()
{
bool result;
var dataProvider = new AnalystWiffDataProvider();
// We're going to extract the Maldi parameters at this point.
this.strmaldiparameters = this.GetMaldiParameters(this.fileName);
try
{
// get wiff file object from given file
Batch wiffFile = AnalystDataProviderFactory.CreateBatch(this.fileName, dataProvider);
// get number of samples
string[] sampleNames = wiffFile.GetSampleNames();
int numOfSamples = sampleNames.GetLength(0);
// create sample objects for all the samples present in the wiff file
for (int actSample = 0; actSample < numOfSamples; actSample++)
{
// create and add the sample to this objects list of samples...
var sample = new WiffSample(wiffFile, this, actSample, this.strmaldiparameters);
this.samples.Add(sample);
}
result = true;
}
catch (Exception e)
{
Util.ReportException(e);
result = false;
}
return(result);
}
public WiffFileReader(string wiffFilePath, string licenseFilePath)
{
if (string.IsNullOrWhiteSpace(wiffFilePath))
{
throw new ArgumentNullException("wiffFilePath");
}
if (string.IsNullOrWhiteSpace(licenseFilePath))
{
throw new ArgumentNullException("licenseFilePath");
}
if (!File.Exists(wiffFilePath))
{
throw new FileNotFoundException("Wiff file not exists.");
}
try
{
ReadWiffLicense(licenseFilePath);
this.dataProvider = new AnalystWiffDataProvider(true);
this.batch = AnalystDataProviderFactory.CreateBatch(wiffFilePath, dataProvider);
this.wiffFilePath = wiffFilePath;
this.model = MzLiteJson.HandleExternalModelFile(this, GetModelFilePath());
}
catch (Exception ex)
{
throw new MzLiteIOException(ex.Message, ex);
}
}
public override void Open()
{
if (IsOpen)
{
return;
}
_dataProvider = new AnalystWiffDataProvider();
_wiffFile = AnalystDataProviderFactory.CreateBatch(FilePath, _dataProvider);
base.Open();
}
public WiffFile(string wiffpath)
{
string[] keys = {
"<?xml version=\"1.0\" encoding=\"utf-8\"?>" +
"<license_key>"+
"<company_name>Proteo Wizard|Redistributable Beta Agreemeent 2012-03-20</company_name>"+
"<product_name>ProcessingFramework</product_name>" +
"<features>WiffReaderSDK</features>"+
"<key_data> Z9360tXYtYTi+Ru6cbynF52hEBoKTFNHT0vYGPCI5ZmmAXRZ+W26Ag== </key_data>"+
"</license_key>"
};
Clearcore2.Licensing.LicenseKeys.Keys = keys;
provider = new AnalystWiffDataProvider();
m_batch = AnalystDataProviderFactory.CreateBatch(wiffpath, provider);
FileInfo tmpfile = new FileInfo(wiffpath);
int pos = tmpfile.Name.LastIndexOf(".");
name = tmpfile.Name.Substring(0, pos);
}
public override void Open()
{
if (IsOpen)
return;
_dataProvider = new AnalystWiffDataProvider();
_wiffFile = AnalystDataProviderFactory.CreateBatch(FilePath, _dataProvider);
base.Open();
}
