private void AddPoolSpecToAnalysis(NameValueCollection formData, AnalysisSpecification spec)
{
if (string.IsNullOrEmpty(formData["poolId"]) && (string.IsNullOrEmpty(formData["targetDedicated"]) || string.IsNullOrEmpty(formData["virtualMachineSize"])))
{
throw new Exception("An existing PoolId or targetDedicated and virtualMachineSize must be specified");
}
if (!string.IsNullOrEmpty(formData["poolId"]))
{
spec.PoolId = formData["poolId"];
}
else
{
spec.TargetDedicated = int.Parse(formData["targetDedicated"]);
spec.VirtualMachineSize = formData["virtualMachineSize"];
spec.PoolDisplayName = formData["poolName"];
}
}
private AnalysisSpecification CreateAnalysisModel(NameValueCollection formData)
{
// note: only to see what is in here, can be removed
foreach (var key in formData.AllKeys)
{
foreach (var val in formData.GetValues(key))
{
Trace.WriteLine(string.Format("{0}: {1}", key, val));
}
}
var spec = new AnalysisSpecification
{
Name = formData["analysisName"],
DatabaseName = formData["databaseName"],
Executable = formData["executable"],
ExecutableArgs = formData["executableArgs"],
AnalysisInputFiles = new List <AnalysisInputFile>(),
SplitSequenceFile = ToBoolean(formData["splitSequenceFile"]),
SequencesPerQuery = ToInt(formData["seqencesPerQuery"], 1),
};
AddPoolSpecToAnalysis(formData, spec);
if (formData["analysisSequenceText"] != null && !string.IsNullOrEmpty(formData["analysisSequenceText"].Trim()))
{
var bytes = Encoding.UTF8.GetBytes(formData["analysisSequenceText"]);
spec.AnalysisInputFiles = new List <AnalysisInputFile>()
{
new AnalysisInputFile
{
Filename = "analysissequence.txt",
Content = new MemoryStream(bytes),
Length = bytes.Length,
}
};
}
return(spec);
}
