public static void Annotate(AnnotatedVariant variant)
{
CoreAnnotationProvider.Annotate(variant);
VariantIdProvider.Annotate(variant);
AlleleFreqProvider.Annotate(variant);
ClinicalAnnotationProvider.Annotate(variant);
}
private async void AddAlleleFreq()
{
while (await _alleleFreqChannel.Reader.WaitToReadAsync())
{
while (_alleleFreqChannel.Reader.TryRead(out var variant))
{
AlleleFreqProvider.Annotate(variant);
}
}
}
private void AddAlleleFrequencies()
{
while (true)
{
_alleleFreqSemaphore.Wait();
if (_isComplete)
{
break;
}
AlleleFreqProvider.Annotate(_variant);
_alleleFreqDone.Release();
}
}
private void AddAlleleFreq()
{
while (true)
{
_alleleConsumer.Wait();
if (!_alleleFreqQueue.TryDequeue(out var variant))
{
if (_isCancelled)
{
break;
}
continue;
}
AlleleFreqProvider.Annotate(variant);
_alleleProducer.Release();
}
}
private void AddAlleleFrequencies()
{
while (true)
{
_alleleFreqSemaphore.Wait();
if (_isCancelled)
{
break;
}
foreach (var variant in _variants)
{
AlleleFreqProvider.Annotate(variant);
}
_alleleFreqDone.Release();
}
}
