public static void sendAIMTCGAAnnotation(string[] inXML)
{
var uri = AIMDataServiceSettings.Default.AIMDataServiceUrl;
try
{
var proxy = new AIM3DataServicePortTypeClient();
proxy.Endpoint.Address = new EndpointAddress(uri);
proxy.submit(inXML);
}
catch (System.Net.WebException ex)
{
Console.WriteLine(ex.Message);
throw new GridServicerException("Error writting to AIM data service", ex);
}
catch (Exception e)
{
Console.WriteLine(e.Message);
throw new GridServicerException("Error writting to AIM data service", e);
}
}
static public void sendAIMTCGAAnnotation(string[] inXML)
{
var uri = AIMDataServiceSettings.Default.AIMDataServiceUrl;
try
{
var proxy = new AIM3DataServicePortTypeClient();
proxy.Endpoint.Address = new EndpointAddress(uri);
proxy.submit(inXML);
}
catch (System.Net.WebException ex)
{
Console.WriteLine(ex.Message);
throw new GridServicerException("Error writting to AIM data service", ex);
}
catch (Exception e)
{
Console.WriteLine(e.Message);
throw new GridServicerException("Error writting to AIM data service", e);
}
}
private CQLQueryResults getAnnotationOfAnnotationCQLInfo()
{
object[] obj = null;
Attribute attrTemp = null;
Association assoTemp = null;
var proxy = new AIM3DataServicePortTypeClient();
proxy.Endpoint.Address = new System.ServiceModel.EndpointAddress(AIMDataServiceSettings.Default.AIMDataServiceUrl);
var associationList = new ArrayList();
obj = null;
Association aecAssociation = null;
foreach (var queryData in _queryParameters.AecQueryParameters)
{
var results = new ArrayList();
if (!queryData.CodeValue.IsEmpty)
{
results.Add(CreateAttribute("codeValue", queryData.CodeValue));
}
if (!queryData.CodeMeaning.IsEmpty)
{
results.Add(CreateAttribute("codeMeaning", queryData.CodeMeaning));
}
if (!queryData.CodingSchemeDesignator.IsEmpty)
{
results.Add(CreateAttribute("codingSchemeDesignator", queryData.CodingSchemeDesignator));
}
if (!queryData.CodingSchemeVersion.IsEmpty)
{
results.Add(CreateAttribute("codingSchemeVersion", queryData.CodingSchemeVersion));
}
if (!queryData.Confidence.IsEmpty)
{
results.Add(CreateAttribute("annotatorConfidence", queryData.Confidence));
}
if (results.Count > 0)
{
obj = (object[])results.ToArray(typeof(object));
}
if (obj != null && obj.Length > 0)
{
Group grpAnnatomicEntityCharacteristic = null;
if (obj.Length > 1)
{
grpAnnatomicEntityCharacteristic = CreateQRAttrAssoGroup.createGroup(obj, LogicalOperator.AND);
obj = null;
}
else
{
attrTemp = obj[0] as Attribute;
}
aecAssociation = CreateQRAttrAssoGroup.createAssociation("edu.northwestern.radiology.aim.AnatomicEntityCharacteristic", "anatomicEntityCharacteristicCollection", grpAnnatomicEntityCharacteristic, attrTemp, null);
}
}
obj = null;
if (aecAssociation != null && _queryParameters.AeQueryParameters.Count == 0)
{
var queryData = new AimAnatomicEntityQueryData();
queryData.CodeMeaning = new QueryData(String.Empty, QueryPredicate.LIKE);
_queryParameters.AeQueryParameters.Add(queryData);
}
foreach (var queryData in _queryParameters.AeQueryParameters)
{
var results = new ArrayList();
if (!queryData.CodeValue.IsEmpty)
{
results.Add(CreateAttribute("codeValue", queryData.CodeValue));
}
//if (!queryData.CodeMeaning.IsEmpty)
results.Add(CreateAttribute("codeMeaning", queryData.CodeMeaning));
if (!queryData.CodingSchemeDesignator.IsEmpty)
{
results.Add(CreateAttribute("codingSchemeDesignator", queryData.CodingSchemeDesignator));
}
if (!queryData.CodingSchemeVersion.IsEmpty)
{
results.Add(CreateAttribute("codingSchemeVersion", queryData.CodingSchemeVersion));
}
if (!queryData.Confidence.IsEmpty)
{
results.Add(CreateAttribute("annotatorConfidence", queryData.Confidence));
}
if (aecAssociation != null)
{
results.Add(aecAssociation);
}
if (results.Count > 0)
{
obj = (object[])results.ToArray(typeof(object));
}
if (obj != null && obj.Length > 0)
{
Group grpAnnatomicEntity = null;
if (obj.Length > 1)
{
grpAnnatomicEntity = CreateQRAttrAssoGroup.createGroup(obj, LogicalOperator.AND);
obj = null;
}
else
{
attrTemp = obj[0] as Attribute;
}
associationList.Add(CreateQRAttrAssoGroup.createAssociation("edu.northwestern.radiology.aim.AnatomicEntity", "anatomicEntityCollection", grpAnnatomicEntity, attrTemp, null));
}
}
obj = null;
Association iocAssociation = null;
foreach (var queryData in _queryParameters.ImcQueryParameters)
{
var results = new ArrayList();
if (!queryData.CodeValue.IsEmpty)
{
results.Add(CreateAttribute("codeValue", queryData.CodeValue));
}
if (!queryData.CodeMeaning.IsEmpty)
{
results.Add(CreateAttribute("codeMeaning", queryData.CodeMeaning));
}
if (!queryData.CodingSchemeDesignator.IsEmpty)
{
results.Add(CreateAttribute("codingSchemeDesignator", queryData.CodingSchemeDesignator));
}
if (!queryData.CodingSchemeVersion.IsEmpty)
{
results.Add(CreateAttribute("codingSchemeVersion", queryData.CodingSchemeVersion));
}
if (!queryData.Confidence.IsEmpty)
{
results.Add(CreateAttribute("annotatorConfidence", queryData.Confidence));
}
if (!queryData.Comment.IsEmpty)
{
results.Add(CreateAttribute("comment", queryData.Comment));
}
if (results.Count > 0)
{
obj = (object[])results.ToArray(typeof(object));
}
if (obj != null && obj.Length > 0)
{
Group grpImagingObservationCharacteristic = null;
if (obj.Length > 1)
{
grpImagingObservationCharacteristic = CreateQRAttrAssoGroup.createGroup(obj, LogicalOperator.AND);
obj = null;
}
else
{
attrTemp = obj[0] as Attribute;
}
iocAssociation = CreateQRAttrAssoGroup.createAssociation("edu.northwestern.radiology.aim.ImagingObservationCharacteristic", "imagingObservationCharacteristicCollection", grpImagingObservationCharacteristic, attrTemp, null);
}
}
obj = null;
if (iocAssociation != null && _queryParameters.ImQueryParameters.Count == 0)
{
var queryData = new AimImagingObservationQueryData();
queryData.CodeMeaning = new QueryData(String.Empty, QueryPredicate.LIKE);
_queryParameters.ImQueryParameters.Add(queryData);
}
foreach (var queryData in _queryParameters.ImQueryParameters)
{
var results = new ArrayList();
if (!queryData.CodeValue.IsEmpty)
{
results.Add(CreateAttribute("codeValue", queryData.CodeValue));
}
//if (!queryData.CodeMeaning.IsEmpty)
results.Add(CreateAttribute("codeMeaning", queryData.CodeMeaning));
if (!queryData.CodingSchemeDesignator.IsEmpty)
{
results.Add(CreateAttribute("codingSchemeDesignator", queryData.CodingSchemeDesignator));
}
if (!queryData.CodingSchemeVersion.IsEmpty)
{
results.Add(CreateAttribute("codingSchemeVersion", queryData.CodingSchemeVersion));
}
if (!queryData.Comment.IsEmpty)
{
results.Add(CreateAttribute("comment", queryData.Comment));
}
if (!queryData.Confidence.IsEmpty)
{
results.Add(CreateAttribute("annotatorConfidence", queryData.Confidence));
}
if (iocAssociation != null)
{
results.Add(iocAssociation);
}
if (results.Count > 0)
{
obj = (object[])results.ToArray(typeof(object));
}
if (obj != null && obj.Length > 0)
{
attrTemp = null;
Group grpImagingObservation = null;
if (obj.Length > 1)
{
grpImagingObservation = CreateQRAttrAssoGroup.createGroup(obj, LogicalOperator.AND);
obj = null;
}
else
{
attrTemp = obj[0] as Attribute;
}
associationList.Add(CreateQRAttrAssoGroup.createAssociation("edu.northwestern.radiology.aim.ImagingObservation", "imagingObservationCollection", grpImagingObservation, attrTemp, null));
}
}
obj = null;
foreach (var queryData in _queryParameters.UserParameters)
{
var results = new ArrayList();
if (!queryData.IsEmpty)
{
results.Add(CreateAttribute("loginName", queryData));
results.Add(CreateAttribute("name", queryData));
}
if (results.Count > 0)
{
obj = (object[])results.ToArray(typeof(Attribute));
}
if (obj != null && obj.Length > 0)
{
Group grpAnnatomicEntityCharacteristic = null;
if (obj.Length > 1)
{
grpAnnatomicEntityCharacteristic = CreateQRAttrAssoGroup.createGroup(obj, LogicalOperator.OR);
obj = null;
}
else
{
attrTemp = obj[0] as Attribute;
}
associationList.Add(CreateQRAttrAssoGroup.createAssociation("edu.northwestern.radiology.aim.User", "user", grpAnnatomicEntityCharacteristic, attrTemp, null));
}
}
obj = null;
Group grpAnnotationOfAnnotation = null;
if (associationList.Count > 0)
{
obj = (object[])associationList.ToArray(typeof(Association));
}
if (obj != null && obj.Length > 0)
{
assoTemp = null;
if (obj.Length > 1)
{
grpAnnotationOfAnnotation = CreateQRAttrAssoGroup.createGroup(obj, LogicalOperator.AND);
}
else
{
assoTemp = obj[0] as Association;
}
}
var arg = CreateQRAttrAssoGroup.createQueryRequestCqlQuery("edu.northwestern.radiology.aim.AnnotationOfAnnotation", null, null, assoTemp, grpAnnotationOfAnnotation);
var doc = XMLSerializingDeserializing.Serialize(arg);
Console.WriteLine(doc.InnerXml);
CQLQueryResults result;
try
{
result = proxy.query(arg);
}
catch (System.Net.WebException ex)
{
Console.WriteLine(ex.Message);
result = null;
}
catch (Exception e)
{
Console.WriteLine(e.Message);
result = null;
throw new GridServicerException("Error querying AIM data service", e);
}
return(result);
}
private CQLQueryResults getAnnotationOfAnnotationCQLInfo()
{
object[] obj = null;
Attribute attrTemp = null;
Association assoTemp = null;
var proxy = new AIM3DataServicePortTypeClient();
proxy.Endpoint.Address = new System.ServiceModel.EndpointAddress(AIMDataServiceSettings.Default.AIMDataServiceUrl);
var associationList = new ArrayList();
obj = null;
Association aecAssociation = null;
foreach (var queryData in _queryParameters.AecQueryParameters)
{
var results = new ArrayList();
if (!queryData.CodeValue.IsEmpty)
results.Add(CreateAttribute("codeValue", queryData.CodeValue));
if (!queryData.CodeMeaning.IsEmpty)
results.Add(CreateAttribute("codeMeaning", queryData.CodeMeaning));
if (!queryData.CodingSchemeDesignator.IsEmpty)
results.Add(CreateAttribute("codingSchemeDesignator", queryData.CodingSchemeDesignator));
if (!queryData.CodingSchemeVersion.IsEmpty)
results.Add(CreateAttribute("codingSchemeVersion", queryData.CodingSchemeVersion));
if (!queryData.Confidence.IsEmpty)
results.Add(CreateAttribute("annotatorConfidence", queryData.Confidence));
if (results.Count > 0)
obj = (object[])results.ToArray(typeof(object));
if (obj != null && obj.Length > 0)
{
Group grpAnnatomicEntityCharacteristic = null;
if (obj.Length > 1)
{
grpAnnatomicEntityCharacteristic = CreateQRAttrAssoGroup.createGroup(obj, LogicalOperator.AND);
obj = null;
}
else
attrTemp = obj[0] as Attribute;
aecAssociation = CreateQRAttrAssoGroup.createAssociation("edu.northwestern.radiology.aim.AnatomicEntityCharacteristic", "anatomicEntityCharacteristicCollection", grpAnnatomicEntityCharacteristic, attrTemp, null);
}
}
obj = null;
if (aecAssociation != null && _queryParameters.AeQueryParameters.Count == 0)
{
var queryData = new AimAnatomicEntityQueryData();
queryData.CodeMeaning = new QueryData(String.Empty, QueryPredicate.LIKE);
_queryParameters.AeQueryParameters.Add(queryData);
}
foreach (var queryData in _queryParameters.AeQueryParameters)
{
var results = new ArrayList();
if (!queryData.CodeValue.IsEmpty)
results.Add(CreateAttribute("codeValue", queryData.CodeValue));
//if (!queryData.CodeMeaning.IsEmpty)
results.Add(CreateAttribute("codeMeaning", queryData.CodeMeaning));
if (!queryData.CodingSchemeDesignator.IsEmpty)
results.Add(CreateAttribute("codingSchemeDesignator", queryData.CodingSchemeDesignator));
if (!queryData.CodingSchemeVersion.IsEmpty)
results.Add(CreateAttribute("codingSchemeVersion", queryData.CodingSchemeVersion));
if (!queryData.Confidence.IsEmpty)
results.Add(CreateAttribute("annotatorConfidence", queryData.Confidence));
if (aecAssociation != null)
results.Add(aecAssociation);
if (results.Count > 0)
obj = (object[])results.ToArray(typeof(object));
if (obj != null && obj.Length > 0)
{
Group grpAnnatomicEntity = null;
if (obj.Length > 1)
{
grpAnnatomicEntity = CreateQRAttrAssoGroup.createGroup(obj, LogicalOperator.AND);
obj = null;
}
else
attrTemp = obj[0] as Attribute;
associationList.Add(CreateQRAttrAssoGroup.createAssociation("edu.northwestern.radiology.aim.AnatomicEntity", "anatomicEntityCollection", grpAnnatomicEntity, attrTemp, null));
}
}
obj = null;
Association iocAssociation = null;
foreach (var queryData in _queryParameters.ImcQueryParameters)
{
var results = new ArrayList();
if (!queryData.CodeValue.IsEmpty)
results.Add(CreateAttribute("codeValue", queryData.CodeValue));
if (!queryData.CodeMeaning.IsEmpty)
results.Add(CreateAttribute("codeMeaning", queryData.CodeMeaning));
if (!queryData.CodingSchemeDesignator.IsEmpty)
results.Add(CreateAttribute("codingSchemeDesignator", queryData.CodingSchemeDesignator));
if (!queryData.CodingSchemeVersion.IsEmpty)
results.Add(CreateAttribute("codingSchemeVersion", queryData.CodingSchemeVersion));
if (!queryData.Confidence.IsEmpty)
results.Add(CreateAttribute("annotatorConfidence", queryData.Confidence));
if (!queryData.Comment.IsEmpty)
results.Add(CreateAttribute("comment", queryData.Comment));
if (results.Count > 0)
obj = (object[])results.ToArray(typeof(object));
if (obj != null && obj.Length > 0)
{
Group grpImagingObservationCharacteristic = null;
if (obj.Length > 1)
{
grpImagingObservationCharacteristic = CreateQRAttrAssoGroup.createGroup(obj, LogicalOperator.AND);
obj = null;
}
else
attrTemp = obj[0] as Attribute;
iocAssociation = CreateQRAttrAssoGroup.createAssociation("edu.northwestern.radiology.aim.ImagingObservationCharacteristic", "imagingObservationCharacteristicCollection", grpImagingObservationCharacteristic, attrTemp, null);
}
}
obj = null;
if (iocAssociation != null && _queryParameters.ImQueryParameters.Count == 0)
{
var queryData = new AimImagingObservationQueryData();
queryData.CodeMeaning = new QueryData(String.Empty, QueryPredicate.LIKE);
_queryParameters.ImQueryParameters.Add(queryData);
}
foreach (var queryData in _queryParameters.ImQueryParameters)
{
var results = new ArrayList();
if (!queryData.CodeValue.IsEmpty)
results.Add(CreateAttribute("codeValue", queryData.CodeValue));
//if (!queryData.CodeMeaning.IsEmpty)
results.Add(CreateAttribute("codeMeaning", queryData.CodeMeaning));
if (!queryData.CodingSchemeDesignator.IsEmpty)
results.Add(CreateAttribute("codingSchemeDesignator", queryData.CodingSchemeDesignator));
if (!queryData.CodingSchemeVersion.IsEmpty)
results.Add(CreateAttribute("codingSchemeVersion", queryData.CodingSchemeVersion));
if (!queryData.Comment.IsEmpty)
results.Add(CreateAttribute("comment", queryData.Comment));
if (!queryData.Confidence.IsEmpty)
results.Add(CreateAttribute("annotatorConfidence", queryData.Confidence));
if (iocAssociation != null)
results.Add(iocAssociation);
if (results.Count > 0)
obj = (object[])results.ToArray(typeof(object));
if (obj != null && obj.Length > 0)
{
attrTemp = null;
Group grpImagingObservation = null;
if (obj.Length > 1)
{
grpImagingObservation = CreateQRAttrAssoGroup.createGroup(obj, LogicalOperator.AND);
obj = null;
}
else
attrTemp = obj[0] as Attribute;
associationList.Add(CreateQRAttrAssoGroup.createAssociation("edu.northwestern.radiology.aim.ImagingObservation", "imagingObservationCollection", grpImagingObservation, attrTemp, null));
}
}
obj = null;
foreach (var queryData in _queryParameters.UserParameters)
{
var results = new ArrayList();
if (!queryData.IsEmpty)
{
results.Add(CreateAttribute("loginName", queryData));
results.Add(CreateAttribute("name", queryData));
}
if (results.Count > 0)
obj = (object[])results.ToArray(typeof(Attribute));
if (obj != null && obj.Length > 0)
{
Group grpAnnatomicEntityCharacteristic = null;
if (obj.Length > 1)
{
grpAnnatomicEntityCharacteristic = CreateQRAttrAssoGroup.createGroup(obj, LogicalOperator.OR);
obj = null;
}
else
attrTemp = obj[0] as Attribute;
associationList.Add(CreateQRAttrAssoGroup.createAssociation("edu.northwestern.radiology.aim.User", "user", grpAnnatomicEntityCharacteristic, attrTemp, null));
}
}
obj = null;
Group grpAnnotationOfAnnotation = null;
if (associationList.Count > 0)
obj = (object[])associationList.ToArray(typeof(Association));
if (obj != null && obj.Length > 0)
{
assoTemp = null;
if (obj.Length > 1)
grpAnnotationOfAnnotation = CreateQRAttrAssoGroup.createGroup(obj, LogicalOperator.AND);
else
assoTemp = obj[0] as Association;
}
var arg = CreateQRAttrAssoGroup.createQueryRequestCqlQuery("edu.northwestern.radiology.aim.AnnotationOfAnnotation", null, null, assoTemp, grpAnnotationOfAnnotation);
var doc = XMLSerializingDeserializing.Serialize(arg);
Console.WriteLine(doc.InnerXml);
CQLQueryResults result;
try
{
result = proxy.query(arg);
}
catch (System.Net.WebException ex)
{
Console.WriteLine(ex.Message);
result = null;
}
catch (Exception e)
{
Console.WriteLine(e.Message);
result = null;
throw new GridServicerException("Error querying AIM data service", e);
}
return result;
}