public void test_Model_addCompartment2()
{
Model m = new Model(2,2);
Compartment c = new Compartment(2,1);
c.setId( "c");
int i = m.addCompartment(c);
assertTrue( i == libsbml.LIBSBML_VERSION_MISMATCH );
assertTrue( m.getNumCompartments() == 0 );
c = null;
m = null;
}
protected override void Import(Model sbmlModel)
{
CreateTopContainer(sbmlModel);
CreateEventsTopContainer();
for (long i = 0; i < sbmlModel.getNumCompartments(); i++)
{
_topContainer.Add(CreateContainerFromCompartment(sbmlModel.getCompartment(i)));
}
CreateSpatialStructureFromModel(_topContainer, sbmlModel.getModel());
AddToProject();
}
public void test_Model_addCompartment1()
{
Model m = new Model(2,2);
Compartment c = new Compartment(2,2);
int i = m.addCompartment(c);
assertTrue( i == libsbml.LIBSBML_INVALID_OBJECT );
c.setId( "c");
i = m.addCompartment(c);
assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
assertTrue( m.getNumCompartments() == 1 );
c = null;
m = null;
}
public void test_Model_addCompartment4()
{
Model m = new Model(2,2);
Compartment c = null;
int i = m.addCompartment(c);
assertTrue( i == libsbml.LIBSBML_OPERATION_FAILED );
assertTrue( m.getNumCompartments() == 0 );
m = null;
}
public void test_Model_createCompartment()
{
Model m = new Model(2,2);
Compartment p = m.createCompartment();
assertTrue( m.getNumCompartments() == 1 );
assertTrue( (p).getLevel() == 2 );
assertTrue( (p).getVersion() == 2 );
m = null;
}
public void test_Model_addCompartment5()
{
Model m = new Model(2,2);
Compartment c = new Compartment(2,2);
c.setId( "c");
Compartment c1 = new Compartment(2,2);
c1.setId( "c");
int i = m.addCompartment(c);
assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
assertTrue( m.getNumCompartments() == 1 );
i = m.addCompartment(c1);
assertTrue( i == libsbml.LIBSBML_DUPLICATE_OBJECT_ID );
assertTrue( m.getNumCompartments() == 1 );
c = null;
c1 = null;
m = null;
}
public void test_ReadSBML_Compartment_L2()
{
Compartment c;
string s = wrapSBML_L2v1("<listOfCompartments>" +
" <compartment id='membrane' size='.3' spatialDimensions='2'" +
" units='area' outside='tissue' constant='false'/>" +
"</listOfCompartments>");
D = libsbml.readSBMLFromString(s);
M = D.getModel();
assertTrue( M.getNumCompartments() == 1 );
c = M.getCompartment(0);
assertEquals( true, c.isSetId() );
assertEquals( false, c.isSetName() );
assertEquals( true, c.isSetVolume() );
assertEquals( true, c.isSetSize() );
assertEquals( true, c.isSetUnits() );
assertEquals( true, c.isSetOutside() );
assertTrue(( "membrane" == c.getId() ));
assertTrue(( "area" == c.getUnits() ));
assertTrue(( "tissue" == c.getOutside() ));
assertTrue( c.getSpatialDimensions() == 2 );
assertTrue( c.getSize() == .3 );
}
public void test_ReadSBML_Compartment_defaults_L2()
{
Compartment c;
string s = wrapSBML_L2v1("<listOfCompartments> <compartment id='cell'/> </listOfCompartments>"
);
D = libsbml.readSBMLFromString(s);
M = D.getModel();
assertTrue( M.getNumCompartments() == 1 );
c = M.getCompartment(0);
assertEquals( true, c.isSetId() );
assertEquals( false, c.isSetName() );
assertEquals( false, c.isSetSize() );
assertEquals( false, c.isSetUnits() );
assertEquals( false, c.isSetOutside() );
assertTrue(( "cell" == c.getId() ));
assertTrue( c.getSpatialDimensions() == 3 );
assertTrue( c.getConstant() == true );
}
public void test_ReadSBML_Compartment_defaults()
{
Compartment c;
string s = wrapSBML_L1v2("<listOfCompartments> <compartment name='cell'/> </listOfCompartments>"
);
D = libsbml.readSBMLFromString(s);
M = D.getModel();
assertTrue( M.getNumCompartments() == 1 );
c = M.getCompartment(0);
assertEquals( true, c.isSetId() );
assertEquals( true, c.isSetVolume() );
assertEquals( false, c.isSetSize() );
assertEquals( false, c.isSetUnits() );
assertEquals( false, c.isSetOutside() );
assertTrue(( "cell" == c.getId() ));
assertTrue( c.getVolume() == 1.0 );
}
public void test_ReadSBML_Compartment()
{
Compartment c;
string s = wrapSBML_L1v2("<listOfCompartments>" +
" <compartment name='mitochondria' volume='.0001' units='milliliters'" +
" outside='cell'/>" +
"</listOfCompartments>");
D = libsbml.readSBMLFromString(s);
M = D.getModel();
assertTrue( M.getNumCompartments() == 1 );
c = M.getCompartment(0);
assertTrue(( "mitochondria" == c.getId() ));
assertTrue(( "milliliters" == c.getUnits() ));
assertTrue(( "cell" == c.getOutside() ));
assertTrue( c.getVolume() == .0001 );
assertEquals( true, c.isSetVolume() );
assertEquals( true, c.isSetSize() );
}