public void test_CVTerm_create()
{
CVTerm term = new CVTerm(libsbml.MODEL_QUALIFIER);
assertTrue( term != null );
assertTrue( term.getQualifierType() == libsbml.MODEL_QUALIFIER );
term = null;
}
public void test_CVTerm_addResource()
{
CVTerm term = new CVTerm(libsbml.MODEL_QUALIFIER);
string resource = "GO6666";
XMLAttributes xa;
assertTrue( term != null );
assertTrue( term.getQualifierType() == libsbml.MODEL_QUALIFIER );
term.addResource(resource);
xa = term.getResources();
assertTrue( xa.getLength() == 1 );
assertTrue(( "rdf:resource" == xa.getName(0) ));
assertTrue(( "GO6666" == xa.getValue(0) ));
term = null;
}
public void test_CVTerm_copyConstructor()
{
CVTerm CVTerm1 = new CVTerm(libsbml.BIOLOGICAL_QUALIFIER);
CVTerm1.addResource("http://www.geneontology.org/#GO:0005892");
assertTrue( CVTerm1.getQualifierType() == libsbml.BIOLOGICAL_QUALIFIER );
assertTrue( CVTerm1.getResources().getLength() == 1 );
assertTrue( CVTerm1.getResources().getValue(0) == "http://www.geneontology.org/#GO:0005892" );
CVTerm CVTerm2 = new CVTerm(CVTerm1);
assertTrue( CVTerm2.getQualifierType() == libsbml.BIOLOGICAL_QUALIFIER );
assertTrue( CVTerm2.getResources().getLength() == 1 );
assertTrue( CVTerm2.getResources().getValue(0) == "http://www.geneontology.org/#GO:0005892" );
CVTerm2 = null;
CVTerm1 = null;
}
public void test_CVTerm_removeResource()
{
CVTerm term = new CVTerm(libsbml.MODEL_QUALIFIER);
string resource = "GO6666";
XMLAttributes xa;
assertTrue( term != null );
assertTrue( term.getQualifierType() == libsbml.MODEL_QUALIFIER );
term.addResource(resource);
xa = term.getResources();
assertTrue( xa.getLength() == 1 );
int i = term.removeResource( "CCC");
assertTrue( i == libsbml.LIBSBML_INVALID_ATTRIBUTE_VALUE );
xa = term.getResources();
assertTrue( xa.getLength() == 1 );
i = term.removeResource(resource);
assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
xa = term.getResources();
assertTrue( xa.getLength() == 0 );
term = null;
}
public void test_CVTerm_createFromNode()
{
XMLAttributes xa;
XMLTriple qual_triple = new XMLTriple("is", "", "bqbiol");
XMLTriple bag_triple = new XMLTriple();
XMLTriple li_triple = new XMLTriple();
XMLAttributes att = new XMLAttributes();
att.add( "", "This is my resource");
XMLAttributes att1 = new XMLAttributes();
XMLToken li_token = new XMLToken(li_triple,att);
XMLToken bag_token = new XMLToken(bag_triple,att1);
XMLToken qual_token = new XMLToken(qual_triple,att1);
XMLNode li = new XMLNode(li_token);
XMLNode bag = new XMLNode(bag_token);
XMLNode node = new XMLNode(qual_token);
bag.addChild(li);
node.addChild(bag);
CVTerm term = new CVTerm(node);
assertTrue( term != null );
assertTrue( term.getQualifierType() == libsbml.BIOLOGICAL_QUALIFIER );
assertTrue( term.getBiologicalQualifierType() == libsbml.BQB_IS );
xa = term.getResources();
assertTrue( xa.getLength() == 1 );
assertTrue(( "rdf:resource" == xa.getName(0) ));
assertTrue(( "This is my resource" == xa.getValue(0) ));
qual_triple = null;
bag_triple = null;
li_triple = null;
li_token = null;
bag_token = null;
qual_token = null;
att = null;
att1 = null;
term = null;
node = null;
bag = null;
li = null;
}
public void test_CVTerm_set_get()
{
CVTerm term = new CVTerm(libsbml.MODEL_QUALIFIER);
assertTrue( term != null );
assertTrue( term.getQualifierType() == libsbml.MODEL_QUALIFIER );
term.setModelQualifierType(libsbml.BQM_IS);
assertTrue( term != null );
assertTrue( term.getQualifierType() == libsbml.MODEL_QUALIFIER );
assertTrue( term.getModelQualifierType() == libsbml.BQM_IS );
term.setQualifierType(libsbml.BIOLOGICAL_QUALIFIER);
term.setBiologicalQualifierType(libsbml.BQB_IS);
assertTrue( term.getQualifierType() == libsbml.BIOLOGICAL_QUALIFIER );
assertTrue( term.getBiologicalQualifierType() == libsbml.BQB_IS );
term = null;
}
public void test_CVTerm_setBiolQualifierType()
{
CVTerm term = new CVTerm(libsbml.BIOLOGICAL_QUALIFIER);
assertTrue( term != null );
assertTrue( term.getQualifierType() == libsbml.BIOLOGICAL_QUALIFIER );
assertTrue( term.getModelQualifierType() == libsbml.BQM_UNKNOWN );
assertTrue( term.getBiologicalQualifierType() == libsbml.BQB_UNKNOWN );
int i = term.setBiologicalQualifierType(libsbml.BQB_IS);
assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
assertTrue( term.getQualifierType() == libsbml.BIOLOGICAL_QUALIFIER );
assertTrue( term.getBiologicalQualifierType() == libsbml.BQB_IS );
assertTrue( term.getModelQualifierType() == libsbml.BQM_UNKNOWN );
i = term.setQualifierType(libsbml.MODEL_QUALIFIER);
assertTrue( i == libsbml.LIBSBML_OPERATION_SUCCESS );
assertTrue( term.getQualifierType() == libsbml.MODEL_QUALIFIER );
assertTrue( term.getModelQualifierType() == libsbml.BQM_UNKNOWN );
assertTrue( term.getBiologicalQualifierType() == libsbml.BQB_UNKNOWN );
i = term.setBiologicalQualifierType(libsbml.BQB_IS);
assertTrue( i == libsbml.LIBSBML_INVALID_ATTRIBUTE_VALUE );
assertTrue( term.getQualifierType() == libsbml.MODEL_QUALIFIER );
assertTrue( term.getModelQualifierType() == libsbml.BQM_UNKNOWN );
assertTrue( term.getBiologicalQualifierType() == libsbml.BQB_UNKNOWN );
term = null;
}