public override void Render()
        {
            YellowstonePathology.Business.Test.LLP.PanelSetOrderLeukemiaLymphoma panelSetOrderLeukemiaLymphoma = (YellowstonePathology.Business.Test.LLP.PanelSetOrderLeukemiaLymphoma) this.m_PanelSetOrder;

            base.OpenTemplate(m_TemplateName);

            string finalDate = string.Empty;

            if (panelSetOrderLeukemiaLymphoma.FinalTime.HasValue)
            {
                finalDate = YellowstonePathology.Business.Document.CaseReportV2.ReportDateTimeFormat(panelSetOrderLeukemiaLymphoma.FinalTime.Value);
            }
            this.SetXmlNodeData("final_date", finalDate);

            this.SetXmlNodeData("client_case", this.m_AccessionOrder.PCAN);

            this.SetDemographicsV2();
            this.SetReportDistribution();
            this.SetCaseHistory();

            YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimenOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrder(panelSetOrderLeukemiaLymphoma.OrderedOn, panelSetOrderLeukemiaLymphoma.OrderedOnId);
            this.SetXmlNodeData("specimen_description", specimenOrder.Description);

            string collectionDateTimeString = YellowstonePathology.Business.Helper.DateTimeExtensions.CombineDateAndTime(specimenOrder.CollectionDate, specimenOrder.CollectionTime);

            this.SetXmlNodeData("date_time_collected", collectionDateTimeString);

            YellowstonePathology.Business.Amendment.Model.AmendmentCollection amendmentCollection = this.m_AccessionOrder.AmendmentCollection.GetAmendmentsForReport(panelSetOrderLeukemiaLymphoma.ReportNo);
            if (amendmentCollection.Count > 0)
            {
                string amendmentTitle = amendmentCollection[0].AmendmentType;
                if (amendmentTitle == "Correction")
                {
                    amendmentTitle = "Corrected Report";
                }
                this.SetXmlNodeData("Amendment", amendmentTitle);
            }
            else
            {
                this.SetXmlNodeData("Amendment", "");
            }

            //AmendmentChange
            YellowstonePathology.Business.Document.AmendmentSection amendmentSection = new YellowstonePathology.Business.Document.AmendmentSection();
            amendmentSection.SetAmendment(amendmentCollection, this.m_ReportXml, this.m_NameSpaceManager, false);

            XmlNode tableNode      = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='marker_name']", this.m_NameSpaceManager);
            XmlNode rowMarkerNode  = tableNode.SelectSingleNode("descendant::w:tr[w:tc/w:p/w:r/w:t='marker_name']", this.m_NameSpaceManager);
            XmlNode insertAfterRow = rowMarkerNode;

            foreach (YellowstonePathology.Business.Flow.FlowMarkerItem markerItem in panelSetOrderLeukemiaLymphoma.FlowMarkerCollection)
            {
                XmlNode rowMarkerNodeClone = rowMarkerNode.Clone();

                rowMarkerNodeClone.SelectSingleNode("descendant::w:r[w:t='marker_name']/w:t", this.m_NameSpaceManager).InnerText   = markerItem.Name;
                rowMarkerNodeClone.SelectSingleNode("descendant::w:r[w:t='marker_result']/w:t", this.m_NameSpaceManager).InnerText = markerItem.Result;

                foreach (YellowstonePathology.Business.Flow.FlowMarkerPanelListItem panelItem in this.m_PanelList)
                {
                    if (panelItem.MarkerName == markerItem.Name)
                    {
                        rowMarkerNodeClone.SelectSingleNode("descendant::w:r[w:t='marker_reference']/w:t", this.m_NameSpaceManager).InnerText = panelItem.Reference;
                    }
                }

                tableNode.InsertAfter(rowMarkerNodeClone, insertAfterRow);
                insertAfterRow = rowMarkerNodeClone;
            }

            tableNode.RemoveChild(rowMarkerNode);

            this.SaveReport();
        }
Beispiel #2
0
        public override void Render()
        {
            YellowstonePathology.Business.Test.Retired.PanelSetOrderHer2AmplificationByFishRetired2 panelSetOrderHer2AmplificationByFishRetired2 = (YellowstonePathology.Business.Test.Retired.PanelSetOrderHer2AmplificationByFishRetired2) this.m_PanelSetOrder;
            this.m_TemplateName = @"\\CFileServer\Documents\ReportTemplates\XmlTemplates\HER2AmplificationByFish.5.xml";

            base.OpenTemplate();

            this.SetDemographicsV2();
            this.SetReportDistribution();
            this.SetCaseHistory();

            if (this.m_AccessionOrder.OrderCancelled == false)
            {
                Document.AmendmentSection amendmentSection = new AmendmentSection();
                amendmentSection.SetAmendment(m_PanelSetOrder.AmendmentCollection, this.m_ReportXml, this.m_NameSpaceManager, true);

                YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimenOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrder(this.m_PanelSetOrder.OrderedOn, this.m_PanelSetOrder.OrderedOnId);
                string collectionDateTimeString = YellowstonePathology.Business.Helper.DateTimeExtensions.CombineDateAndTime(specimenOrder.CollectionDate, specimenOrder.CollectionTime);

                this.SetXmlNodeData("date_time_collected", collectionDateTimeString);
                this.SetXmlNodeData("test_result", panelSetOrderHer2AmplificationByFishRetired2.Result);

                if (panelSetOrderHer2AmplificationByFishRetired2.Her2Chr17Ratio.HasValue == true)
                {
                    this.SetXmlNodeData("test_ratio", "Ratio = " + panelSetOrderHer2AmplificationByFishRetired2.Her2Chr17Ratio);
                }
                else
                {
                    this.DeleteRow("test_ratio");
                }

                if (panelSetOrderHer2AmplificationByFishRetired2.AverageHer2NeuSignal.HasValue == true)
                {
                    this.SetXmlNodeData("averageher2_copynumber", "Average HER2 Copy Number = " + panelSetOrderHer2AmplificationByFishRetired2.AverageHer2NeuSignal.Value.ToString());
                }
                else
                {
                    this.DeleteRow("averageher2_copynumber");
                }

                this.SetXmlNodeData("final_date", BaseData.GetShortDateString(this.m_PanelSetOrder.FinalDate));

                if (string.IsNullOrEmpty(panelSetOrderHer2AmplificationByFishRetired2.ResultComment) == false)
                {
                    this.SetXmlNodeData("result_comment", panelSetOrderHer2AmplificationByFishRetired2.ResultComment);
                }
                else
                {
                    this.DeleteRow("result_comment");
                }

                this.SetXmlNodeData("cell_cnt", panelSetOrderHer2AmplificationByFishRetired2.CellsCounted.ToString());
                this.SetXmlNodeData("obs_cnt", panelSetOrderHer2AmplificationByFishRetired2.NumberOfObservers.ToString());
                if (panelSetOrderHer2AmplificationByFishRetired2.AverageHer2NeuSignal.HasValue == true)
                {
                    this.SetXmlNodeData("avg_her", panelSetOrderHer2AmplificationByFishRetired2.AverageHer2NeuSignal.Value.ToString());
                }
                this.SetXmlNodeData("avg_chr", panelSetOrderHer2AmplificationByFishRetired2.AverageChr17Signal);
                if (panelSetOrderHer2AmplificationByFishRetired2.Her2Chr17Ratio.HasValue == true)
                {
                    this.SetXmlNodeData("tst_ratio", panelSetOrderHer2AmplificationByFishRetired2.Her2Chr17Ratio.Value.ToString());
                }

                XmlNode tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='report_interpretation']", this.m_NameSpaceManager);
                this.SetXMLNodeParagraphDataNode(tableNode, "report_interpretation", panelSetOrderHer2AmplificationByFishRetired2.InterpretiveComment);
                this.SetXmlNodeData("time_of_fixation", specimenOrder.FixationDurationString);

                YellowstonePathology.Business.Test.AliquotOrder aliquotOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetAliquotOrder(this.m_PanelSetOrder.OrderedOnId);
                string blockDescription = string.Empty;
                if (aliquotOrder != null)
                {
                    blockDescription = " - Block " + aliquotOrder.Label;
                }

                SetXmlNodeData("specimen_type", specimenOrder.Description + blockDescription);
                SetXmlNodeData("specimen_fixation", specimenOrder.LabFixation);
                SetXmlNodeData("time_to_fixation", specimenOrder.TimeToFixationHourString);

                this.SetXmlNodeData("report_reference", panelSetOrderHer2AmplificationByFishRetired2.ReportReference);
                SetXmlNodeData("duration_of_fixation", specimenOrder.FixationDurationString);

                if (panelSetOrderHer2AmplificationByFishRetired2.Result != "NOT INTERPRETABLE")
                {
                    this.SetXmlNodeData("fixation_comment", specimenOrder.FixationComment);
                }
                else
                {
                    this.DeleteRow("fixation_comment");
                    SetXmlNodeData("avg_her", string.Empty);
                    SetXmlNodeData("tst_ratio", string.Empty);
                }

                SetXmlNodeData("sample_adequacy", panelSetOrderHer2AmplificationByFishRetired2.SampleAdequacy);
                SetXmlNodeData("date_time_collected", collectionDateTimeString);
                SetXmlNodeData("report_distribution", "No Distribution Selected");

                this.SetXmlNodeData("pathologist_signature", this.m_PanelSetOrder.Signature);
            }
            else
            {
                this.SetXmlNodeData("result_comment", panelSetOrderHer2AmplificationByFishRetired2.ResultComment);
                this.SetXmlNodeData("final_date", BaseData.GetShortDateString(this.m_PanelSetOrder.FinalDate));
            }

            this.SaveReport();
        }
        public override void Render()
        {
            YellowstonePathology.Business.Test.Retired.PanelSetOrderHer2AmplificationByFishRetired2 panelSetOrderHer2AmplificationByFishRetired2 = (YellowstonePathology.Business.Test.Retired.PanelSetOrderHer2AmplificationByFishRetired2)this.m_PanelSetOrder;
            this.m_TemplateName = @"\\CFileServer\Documents\ReportTemplates\XmlTemplates\HER2AmplificationByFish.5.xml";

            base.OpenTemplate();

            this.SetDemographicsV2();
            this.SetReportDistribution();
            this.SetCaseHistory();

            if (this.m_AccessionOrder.OrderCancelled == false)
            {
                Document.AmendmentSection amendmentSection = new AmendmentSection();
                amendmentSection.SetAmendment(m_PanelSetOrder.AmendmentCollection, this.m_ReportXml, this.m_NameSpaceManager, true);

                YellowstonePathology.Business.Specimen.Model.SpecimenOrder specimenOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetSpecimenOrder(this.m_PanelSetOrder.OrderedOn, this.m_PanelSetOrder.OrderedOnId);
                string collectionDateTimeString = YellowstonePathology.Business.Helper.DateTimeExtensions.CombineDateAndTime(specimenOrder.CollectionDate, specimenOrder.CollectionTime);

                this.SetXmlNodeData("date_time_collected", collectionDateTimeString);
                this.SetXmlNodeData("test_result", panelSetOrderHer2AmplificationByFishRetired2.Result);

                if (panelSetOrderHer2AmplificationByFishRetired2.Her2Chr17Ratio.HasValue == true)
                {
                    this.SetXmlNodeData("test_ratio", "Ratio = " + panelSetOrderHer2AmplificationByFishRetired2.Her2Chr17Ratio);
                }
                else
                {
                    this.DeleteRow("test_ratio");
                }

                if (panelSetOrderHer2AmplificationByFishRetired2.AverageHer2NeuSignal.HasValue == true)
                {
                    this.SetXmlNodeData("averageher2_copynumber", "Average HER2 Copy Number = " + panelSetOrderHer2AmplificationByFishRetired2.AverageHer2NeuSignal.Value.ToString());
                }
                else
                {
                    this.DeleteRow("averageher2_copynumber");
                }

                this.SetXmlNodeData("final_date", BaseData.GetShortDateString(this.m_PanelSetOrder.FinalDate));

                if (string.IsNullOrEmpty(panelSetOrderHer2AmplificationByFishRetired2.ResultComment) == false)
                {
                    this.SetXmlNodeData("result_comment", panelSetOrderHer2AmplificationByFishRetired2.ResultComment);
                }
                else
                {
                    this.DeleteRow("result_comment");
                }

                this.SetXmlNodeData("cell_cnt", panelSetOrderHer2AmplificationByFishRetired2.CellsCounted.ToString());
                this.SetXmlNodeData("obs_cnt", panelSetOrderHer2AmplificationByFishRetired2.NumberOfObservers.ToString());
                if (panelSetOrderHer2AmplificationByFishRetired2.AverageHer2NeuSignal.HasValue == true) this.SetXmlNodeData("avg_her", panelSetOrderHer2AmplificationByFishRetired2.AverageHer2NeuSignal.Value.ToString());
                this.SetXmlNodeData("avg_chr", panelSetOrderHer2AmplificationByFishRetired2.AverageChr17Signal);
                if (panelSetOrderHer2AmplificationByFishRetired2.Her2Chr17Ratio.HasValue == true) this.SetXmlNodeData("tst_ratio", panelSetOrderHer2AmplificationByFishRetired2.Her2Chr17Ratio.Value.ToString());

                XmlNode tableNode = this.m_ReportXml.SelectSingleNode("descendant::w:tbl[w:tr/w:tc/w:p/w:r/w:t='report_interpretation']", this.m_NameSpaceManager);
                this.SetXMLNodeParagraphDataNode(tableNode, "report_interpretation", panelSetOrderHer2AmplificationByFishRetired2.InterpretiveComment);
                this.SetXmlNodeData("time_of_fixation", specimenOrder.FixationDurationString);

                YellowstonePathology.Business.Test.AliquotOrder aliquotOrder = this.m_AccessionOrder.SpecimenOrderCollection.GetAliquotOrder(this.m_PanelSetOrder.OrderedOnId);
                string blockDescription = string.Empty;
                if (aliquotOrder != null)
                {
                    blockDescription = " - Block " + aliquotOrder.Label;
                }

                SetXmlNodeData("specimen_type", specimenOrder.Description + blockDescription);
                SetXmlNodeData("specimen_fixation", specimenOrder.LabFixation);
                SetXmlNodeData("time_to_fixation", specimenOrder.TimeToFixationHourString);

                this.SetXmlNodeData("report_reference", panelSetOrderHer2AmplificationByFishRetired2.ReportReference);
                SetXmlNodeData("duration_of_fixation", specimenOrder.FixationDurationString);

                if (panelSetOrderHer2AmplificationByFishRetired2.Result != "NOT INTERPRETABLE")
                {
                    this.SetXmlNodeData("fixation_comment", specimenOrder.FixationComment);
                }
                else
                {
                    this.DeleteRow("fixation_comment");
                    SetXmlNodeData("avg_her", string.Empty);
                    SetXmlNodeData("tst_ratio", string.Empty);
                }

                SetXmlNodeData("sample_adequacy", panelSetOrderHer2AmplificationByFishRetired2.SampleAdequacy);
                SetXmlNodeData("date_time_collected", collectionDateTimeString);
                SetXmlNodeData("report_distribution", "No Distribution Selected");

                this.SetXmlNodeData("pathologist_signature", this.m_PanelSetOrder.Signature);
            }
            else
            {
                this.SetXmlNodeData("result_comment", panelSetOrderHer2AmplificationByFishRetired2.ResultComment);
                this.SetXmlNodeData("final_date", BaseData.GetShortDateString(this.m_PanelSetOrder.FinalDate));
            }

            this.SaveReport();
        }