public void TestRumRun()
{
var rum = new Rum(true);
var patient = new PatientIdentifier() { InternalId = new Guid(PGuid) };
var patData = rum.GetPatientData(patient);
Assert.IsTrue(patData.FindAll(p => p.Patient.InternalId == patient.InternalId).Count == 1, "There are no entries for test patient, why?");
Assert.IsTrue(patData.FindAll(p => p.Data.FindAll(d => d.OntologicName == "rdf:TestEntry").Count > 0).Count == 1, "PhrPluginEmpty should have been returned DataUnit with a TestEntry.");
Assert.IsTrue(patData.FindAll(p => p.Data.FindAll(d => d.OntologicName == "rdf:DifferentTestEntry").Count > 0).Count == 0, "DifferentTestEntry should have been filtered out by RUMs' config.");
}
public string GetUserName(PatientIdentifier p)
{
if (authMap == null)
{
LoadAuthTokens();
}
if (this.authMap.ContainsKey(p.InternalId.ToString())) return ((CarreAuthToken)authMap[p.InternalId.ToString()]).Username;
return null;
}
public CarreAuthToken GetAuthToken(PatientIdentifier p)
{
CarreAuthToken t = new CarreAuthToken();
if (authMap == null)
{
LoadAuthTokens();
}
if (this.authMap.ContainsKey(p.InternalId.ToString())) return (CarreAuthToken)authMap[p.InternalId.ToString()];
return null;
}
public List<PhrData> GetMockData()
{
PatientIdentifier patient1 = new PatientIdentifier()
{
InternalId = new Guid(guid)
};
SourceIdentifier source1 = new SourceIdentifier()
{
InternalId = new Guid("5c30ee9a-2e63-42c7-b418-ef4fe2f3e565"),
SourceName = "vivaport"
};
List<PhrData> TestData = new List<PhrData>() {
new PhrData() {
Patient = patient1,
Source = source1,
Data = new List<DataUnit>() {
new DataUnit() {
OntologicName = "test1",
Datetime = DateTime.Now.Date.AddDays(-2), //overrides value-1
Identifier = "identifier-1",
Name = "name-1",
Value = "value-1",
Source = source1,
OntologicType = "string",
},
new DataUnit() {
OntologicName = "test2",
Datetime = DateTime.Now.Date.AddDays(-2),
Identifier = "identifier-2",
Name = "name-2",
Value = "value-1-1",
Source = source1,
OntologicType = "string",
}
}
},
};
return TestData;
}
public void TestUnification()
{
var unificator = new Unificator();
unificator.LoadUnificationRules("../../Fixtures/SourcePriorities.xml");
PatientIdentifier patient1 = new PatientIdentifier() {
InternalId = new Guid("5c30ee9a-2e63-42c7-b418-ef4fe2f3e565")
};
PatientIdentifier patient2 = new PatientIdentifier() {
InternalId = new Guid("5c30ee9a-2e63-42c7-b418-ef4fe2f3e566") // should be untouched
};
SourceIdentifier source1 = new SourceIdentifier() {
InternalId = new Guid("5c30ee9a-2e63-42c7-b418-ef4fe2f3e565"), // has priority 10
SourceName = "FAKE"
};
SourceIdentifier source2 = new SourceIdentifier() {
InternalId = new Guid("5c30ee9a-2e63-42c7-b418-ef4fe2f3e566"), // has priority 20
SourceName = "FAKE"
};
List<PhrData> TestData = new List<PhrData>() {
new PhrData() {
Patient = patient1,
Source = source1,
Data = new List<DataUnit>() {
new DataUnit() {
OntologicName = "test1",
Datetime = DateTime.Now.Date.AddDays(-2), //overrides value-1
Identifier = "identifier-1",
Name = "name-1",
Value = "value-1"
},
new DataUnit() {
OntologicName = "test2",
Datetime = DateTime.Now.Date.AddDays(-2),
Identifier = "identifier-2",
Name = "name-2",
Value = "value-1-1"
}
}
},
new PhrData() {
Patient = patient1,
Source = source2, // priority of 20, should be overriden
Data = new List<DataUnit>() {
new DataUnit() {
OntologicName = "test1",
Datetime = DateTime.Now.Date.AddDays(-2),
Identifier = "identifier-1",
Name = "name-1",
Value = "value-1-3"
},
new DataUnit() {
OntologicName = "test2",
Datetime = DateTime.Now.Date.AddDays(-1), //newer, should override
Identifier = "identifier-2",
Name = "name-2",
Value = "value-1-4"
}
}
},
new PhrData() {
Patient = patient2,
Source = source2,
Data = new List<DataUnit>() {
new DataUnit() {
OntologicName = "test1",
Datetime = DateTime.Now.AddDays(-2),
Identifier = "identifier-1",
Name = "name-1",
Value = "value-1"
},
new DataUnit() {
OntologicName = "test2",
Datetime = DateTime.Now.AddDays(-1),
Identifier = "identifier-2",
Name = "name-2",
Value = "value-1-1"
}
}
},
};
List<PhrData> result = unificator.Unify(TestData);
Assert.IsTrue(result.Exists(phd => phd.Patient == patient1), "patient1 should exist in list.");
Assert.IsTrue(result.Exists(phd => phd.Patient == patient2), "patient2 should exist in list.");
Assert.IsTrue(result.FindAll(phd => phd.Patient == patient1).Exists(pd => pd.Data.Exists(dat => dat.Name == "name-1")), "patient1 data missing");
Assert.IsTrue(result.FindAll(phd => phd.Patient == patient1).Exists(pd => pd.Data.Exists(dat => dat.Name == "name-2")), "patient1 data missing");
Assert.IsTrue(result.FindAll(phd => phd.Patient == patient2).Exists(pd => pd.Data.Exists(dat => dat.Name == "name-1")), "patient2 data missing");
Assert.IsTrue(result.FindAll(phd => phd.Patient == patient2).Exists(pd => pd.Data.Exists(dat => dat.Name == "name-2")), "patient2 data missing");
Assert.IsTrue(result.FindAll(phd => phd.Patient == patient2).Exists(pd => pd.Data.Exists(dat => dat.Name == "name-1" && dat.Value == "value-1")), "patient2 data touched!");
Assert.IsTrue(result.FindAll(phd => phd.Patient == patient2).Exists(pd => pd.Data.Exists(dat => dat.Name == "name-2" && dat.Value == "value-1-1")), "patient2 data touched!");
Assert.IsTrue(result.FindAll(phd => phd.Patient == patient1).FindAll(pd => pd.Data.Exists(dat => dat.Name == "name-1")).Count == 1);
Assert.IsTrue(result.FindAll(phd => phd.Patient == patient1).FindAll(pd => pd.Data.Exists(dat => dat.Name == "name-2")).Count == 1);
Assert.IsTrue(result.FindAll(phd => phd.Patient == patient1).Exists(pd => pd.Data.Exists(dat => dat.Name == "name-1" && dat.Value == "value-1")), "patient1 data identifier-1 is not value-1!");
Assert.IsTrue(result.FindAll(phd => phd.Patient == patient1).Exists(pd => pd.Data.Exists(dat => dat.Name == "name-2" && dat.Value == "value-1-4")), "partient1 data name-2 is not value-1-4!");
}
