public static ClassificationOptions LoadOptions(XElement parentNode)
{
var result = new ClassificationOptions();
result.Load(parentNode);
return(result);
}
public BuildSummaryOptions()
{
MergeResult = true;
KeepTopPeptideFromSameEngineButDifferentSearchParameters = true;
SavePeptidesFile = true;
IsSemiPeptideConsiderAsUnique = true;
Database = new DatabaseOptions();
FalseDiscoveryRate = new FalseDiscoveryRateOptions();
Classification = new ClassificationOptions();
PeptideFilter = new PeptideFilterOptions();
DatasetList = new DatasetListOptions();
ConflictType = ResolveSearchEngineConflictTypeFactory.QValue;
MinimumEngineAgreeCount = 1;
PeptideRetrieval = false;
}