private string[] GetVcfFields(VariantSite varSite, VariantInfo variantInfo, string altAlleleColumn, List <int>[] sampleGenoTypes, string variantId = VariantId, string info = InfoTag)
{
var vcfFields = new List <string>
{
_chrName,
varSite.Start.ToString(),
variantId,
varSite.RefAllele,
altAlleleColumn,
variantInfo.Qual,
variantInfo.GetMnvFilterTag(),
info
};
AddFormatAndSampleColumns(sampleGenoTypes, variantInfo, ref vcfFields);
return(vcfFields.ToArray());
}
