private SensitivityAnalysisRunResultsImport createSensitivityAnalysisRunResultsFrom(IReadOnlyList <PKParameterSensitivitiesImport> allImportedResults, IModelCoreSimulation simulation)
{
var sensitivityAnalysisRunResultsImport = new SensitivityAnalysisRunResultsImport();
//First add all available results
allImportedResults.Each(import => addPKParameterSensitivitiesFromSingleFile(sensitivityAnalysisRunResultsImport, import));
//now check that the defined outputs are actually available in the population simulation
validateImportedQuantities(sensitivityAnalysisRunResultsImport, simulation);
return(sensitivityAnalysisRunResultsImport);
}
private void addImportedQuantityToLogForSuccessfulImport(SensitivityAnalysisRunResultsImport sensitivityAnalysisRunResultsImport)
{
if (sensitivityAnalysisRunResultsImport.Status.Is(NotificationType.Error))
{
return;
}
sensitivityAnalysisRunResultsImport.AddInfo(Messages.FollowingPKParameterSensitivityWereSuccessfullyImported);
foreach (var pkParameterSensitivity in sensitivityAnalysisRunResultsImport.SensitivityAnalysisRunResult.AllPKParameterSensitivities)
{
sensitivityAnalysisRunResultsImport.AddInfo(pkParameterSensitivity.ToString());
}
}
private void validateImportedQuantities(SensitivityAnalysisRunResultsImport sensitivityAnalysisRunResultsImport, IModelCoreSimulation modelCoreSimulation)
{
var allOutputs = _quantitiesRetriever.OutputsFrom(modelCoreSimulation);
foreach (var quantityPath in sensitivityAnalysisRunResultsImport.SensitivityAnalysisRunResult.AllPKParameterSensitivities.Select(x => x.QuantityPath).Distinct())
{
var quantity = allOutputs[quantityPath];
if (quantity != null)
{
continue;
}
sensitivityAnalysisRunResultsImport.AddError(Error.CouldNotFindQuantityWithPath(quantityPath));
}
}
private void addPKParameterSensitivitiesFromSingleFile(SensitivityAnalysisRunResultsImport sensitivityAnalysisRunResultsImport, PKParameterSensitivitiesImport pkParameterSensitivitiesImport)
{
var sensitivityAnalysisRunResult = sensitivityAnalysisRunResultsImport.SensitivityAnalysisRunResult;
sensitivityAnalysisRunResultsImport.PKParameterSensitivitiesImportFiles.Add(pkParameterSensitivitiesImport.PKParameterSensitivitiesImportFile);
foreach (var pkParameterSensitivity in pkParameterSensitivitiesImport.PKParameterSensitivities)
{
if (sensitivityAnalysisRunResult.HasPKParameterSensitivityWithId(pkParameterSensitivity.Id))
{
sensitivityAnalysisRunResultsImport.AddError(Error.DuplicatedPKParameterSensitivityFor(pkParameterSensitivity.Id));
}
else
{
sensitivityAnalysisRunResult.AddPKParameterSensitivity(pkParameterSensitivity);
}
}
}
