public static Cell Deserialize(StreamReader sr)
{
Cell cell = new Cell();
HtmSerializer2 ser = new HtmSerializer2();
while (sr.Peek() >= 0)
{
string data = sr.ReadLine();
if (data == String.Empty || data == ser.ReadBegin(nameof(Cell)) || data.ToCharArray()[0] == HtmSerializer2.ElementsDelimiter || (data.ToCharArray()[0] == HtmSerializer2.ElementsDelimiter && data.ToCharArray()[1] == HtmSerializer2.ParameterDelimiter))
{
continue;
}
else if (data == ser.ReadBegin(nameof(DistalDendrite)))
{
cell.DistalDendrites.Add(DistalDendrite.Deserialize(sr));
}
else if (data == ser.ReadBegin(nameof(Synapse)))
{
return(cell);
}
else if (data == ser.ReadEnd(nameof(Cell)))
{
break;
}
else
{
string[] str = data.Split(HtmSerializer2.ParameterDelimiter);
for (int i = 0; i < str.Length; i++)
{
switch (i)
{
case 0:
{
cell.Index = ser.ReadIntValue(str[i]);
break;
}
case 1:
{
cell.CellId = ser.ReadIntValue(str[i]);
break;
}
case 2:
{
cell.ParentColumnIndex = ser.ReadIntValue(str[i]);
break;
}
default:
{ break; }
}
}
}
}
return(cell);
}
public static SparseObjectMatrix <T> Deserialize(StreamReader sr)
{
SparseObjectMatrix <T> sparse = new SparseObjectMatrix <T>();
HtmSerializer2 ser = new HtmSerializer2();
while (sr.Peek() >= 0)
{
string data = sr.ReadLine();
if (data == String.Empty || data == ser.ReadBegin(nameof(SparseObjectMatrix <T>)))
{
continue;
}
else if (data == ser.ReadBegin(nameof(HtmModuleTopology)))
{
sparse.ModuleTopology = HtmModuleTopology.Deserialize(sr);
}
//else if (data == ser.ReadBegin(nameof(InMemoryDistributedDictionary<TKey, TValue>) <{ nameof(TKey}>))
//{
// sparse.m_SparseMap = InMemoryDistributedDictionary<TKey, TValue>.Deserialize(sr);
//}
else if (data == ser.ReadEnd(nameof(SparseObjectMatrix <T>)))
{
break;
}
else
{
string[] str = data.Split(HtmSerializer2.ParameterDelimiter);
for (int i = 0; i < str.Length; i++)
{
switch (i)
{
case 0:
{
//sparse.IsRemotelyDistributed = ser.ReadBoolValue(str[i]);
break;
}
default:
{ break; }
}
}
}
}
return(sparse);
}
public static SparseBinaryMatrix Deserialize(StreamReader sr)
{
SparseBinaryMatrix sparse = new SparseBinaryMatrix();
HtmSerializer2 ser = new HtmSerializer2();
while (sr.Peek() >= 0)
{
string data = sr.ReadLine();
if (data == String.Empty || data == ser.ReadBegin(nameof(SparseBinaryMatrix)))
{
continue;
}
else if (data == ser.ReadBegin(nameof(InMemoryArray)))
{
sparse.backingArray = InMemoryArray.Deserialize(sr);
}
else if (data == ser.ReadBegin(nameof(HtmModuleTopology)))
{
sparse.ModuleTopology = HtmModuleTopology.Deserialize(sr);
}
else if (data == ser.ReadEnd(nameof(SparseBinaryMatrix)))
{
break;
}
else
{
string[] str = data.Split(HtmSerializer2.ParameterDelimiter);
for (int i = 0; i < str.Length; i++)
{
switch (i)
{
case 0:
{
sparse.trueCounts = ser.ReadArrayInt(str[i]);
break;
}
default:
{ break; }
}
}
}
}
return(sparse);
}
public static Pool Deserialize(StreamReader sr)
{
Pool pool = new Pool();
HtmSerializer2 ser = new HtmSerializer2();
while (sr.Peek() >= 0)
{
string data = sr.ReadLine();
if (data == String.Empty || data == ser.ReadBegin(nameof(Pool)) || (data.ToCharArray()[0] == HtmSerializer2.ElementsDelimiter && data.ToCharArray()[1] == HtmSerializer2.ParameterDelimiter))
{
continue;
}
else if (data == ser.ReadEnd(nameof(Pool)))
{
break;
}
else if (data.Contains(HtmSerializer2.KeyValueDelimiter))
{
int val = ser.ReadKeyISValue(data);
data = sr.ReadLine();
pool.m_SynapsesBySourceIndex.Add(val, Synapse.Deserialize(sr));
}
else
{
string[] str = data.Split(HtmSerializer2.ParameterDelimiter);
for (int i = 0; i < str.Length; i++)
{
switch (i)
{
case 0:
{
pool.size = ser.ReadIntValue(str[i]);
break;
}
case 1:
{
pool.NumInputs = ser.ReadIntValue(str[i]);
break;
}
case 2:
{
pool.m_SynapseConnections = ser.ReadListInt(str[i]);
break;
}
default:
{ break; }
}
}
}
}
return(pool);
}
public static HtmModuleTopology Deserialize(StreamReader sr)
{
HtmModuleTopology htm = new HtmModuleTopology();
HtmSerializer2 ser = new HtmSerializer2();
while (sr.Peek() >= 0)
{
string data = sr.ReadLine();
if (data == ser.LineDelimiter || data == ser.ReadBegin(nameof(HtmModuleTopology)) || data == ser.ReadEnd(nameof(SegmentActivity)))
{
continue;
}
else if (data == ser.ReadEnd(nameof(HtmModuleTopology)))
{
break;
}
else
{
string[] str = data.Split(HtmSerializer2.ParameterDelimiter);
for (int i = 0; i < str.Length; i++)
{
switch (i)
{
case 0:
{
htm.Dimensions = ser.ReadArrayInt(str[i]);
break;
}
case 1:
{
htm.IsMajorOrdering = ser.ReadBoolValue(str[i]);
break;
}
case 2:
{
htm.DimensionMultiplies = ser.ReadArrayInt(str[i]);
break;
}
default:
{ break; }
}
}
}
}
return(htm);
}
public static Topology Deserialize(StreamReader sr)
{
Topology topology = new Topology();
HtmSerializer2 ser = new HtmSerializer2();
while (sr.Peek() >= 0)
{
string data = sr.ReadLine();
if (data == String.Empty || data == ser.ReadBegin(nameof(Topology)))
{
continue;
}
else
{
string[] str = data.Split(HtmSerializer2.ParameterDelimiter);
for (int i = 0; i < str.Length; i++)
{
switch (i)
{
case 0:
{
topology.dimensions = ser.ReadArrayInt(str[i]);
break;
}
case 1:
{
topology.dimensionMultiples = ser.ReadArrayInt(str[i]);
break;
}
case 2:
{
topology.isColumnMajor = ser.ReadBoolValue(str[i]);
break;
}
case 3:
{
topology.numDimensions = ser.ReadIntValue(str[i]);
break;
}
}
}
}
}
return(topology);
}
public static SegmentActivity Deserialize(StreamReader sr)
{
SegmentActivity segment = new SegmentActivity();
HtmSerializer2 ser = new HtmSerializer2();
while (sr.Peek() >= 0)
{
string data = sr.ReadLine();
if (data == ser.LineDelimiter || data == ser.ReadBegin(nameof(SegmentActivity)) || data == ser.ReadEnd(nameof(SegmentActivity)))
{
}
else
{
string[] str = data.Split(HtmSerializer2.ParameterDelimiter);
for (int i = 0; i < str.Length; i++)
{
switch (i)
{
case 0:
{
segment.ActiveSynapses = ser.ReadDictionaryIIValue(str[i]);
break;
}
case 1:
{
segment.PotentialSynapses = ser.ReadDictionaryIIValue(str[i]);
break;
}
default:
{ break; }
}
}
}
}
return(segment);
}
public static Integer Deserialize(StreamReader sr)
{
Integer inte = new Integer();
HtmSerializer2 ser = new HtmSerializer2();
while (sr.Peek() >= 0)
{
string data = sr.ReadLine();
if (data == String.Empty || data == ser.ReadBegin(nameof(Integer)))
{
continue;
}
else if (data == ser.ReadEnd(nameof(Integer)))
{
break;
}
else
{
string[] str = data.Split(HtmSerializer2.ParameterDelimiter);
for (int i = 0; i < str.Length; i++)
{
switch (i)
{
case 0:
{
inte.Value = ser.ReadIntValue(str[i]);
break;
}
default:
{ break; }
}
}
}
}
return(inte);
}
public static ProximalDendrite Deserialize(StreamReader sr)
{
ProximalDendrite proximal = new ProximalDendrite();
HtmSerializer2 ser = new HtmSerializer2();
while (sr.Peek() >= 0)
{
string data = sr.ReadLine();
if (data == String.Empty || data == ser.ReadBegin(nameof(ProximalDendrite)) || (data.ToCharArray()[0] == HtmSerializer2.ElementsDelimiter && data.ToCharArray()[1] == HtmSerializer2.ParameterDelimiter) || data.ToCharArray()[1] == HtmSerializer2.ParameterDelimiter)
{
continue;
}
else if (data == ser.ReadBegin(nameof(Pool)))
{
proximal.RFPool = Pool.Deserialize(sr);
}
//else if (data == ser.ReadBegin(nameof(Integer)))
//{
// proximal.boxedIndex = Integer.Deserialize(sr);
//}
else if (data == ser.ReadBegin(nameof(Synapse)))
{
proximal.Synapses.Add(Synapse.Deserialize(sr));
}
else if (data == ser.ReadEnd(nameof(ProximalDendrite)))
{
break;
}
else
{
string[] str = data.Split(HtmSerializer2.ParameterDelimiter);
for (int i = 0; i < str.Length; i++)
{
switch (i)
{
case 0:
{
proximal.SegmentIndex = ser.ReadIntValue(str[i]);
break;
}
case 1:
{
proximal.SynapsePermConnected = ser.ReadDoubleValue(str[i]);
break;
}
case 2:
{
proximal.NumInputs = ser.ReadIntValue(str[i]);
break;
}
default:
{ break; }
}
}
}
}
return(proximal);
}
public static Column Deserialize(StreamReader sr)
{
Column column = new Column();
HtmSerializer2 ser = new HtmSerializer2();
while (!sr.EndOfStream)
{
string data = sr.ReadLine();
if (data == String.Empty || data == ser.ReadBegin(nameof(Column)) || data == ser.ValueDelimiter)
{
continue;
}
else if (data == ser.ReadBegin(nameof(SparseBinaryMatrix)))
{
column.connectedInputCounter = SparseBinaryMatrix.Deserialize(sr);
}
//else if (data == ser.ReadBegin(nameof(SparseBinaryMatrix)))
//{
// column.ConnectedInputCounterMatrix = SparseBinaryMatrix.Deserialize(sr);
//}
else if (data == ser.ReadBegin(nameof(ProximalDendrite)))
{
column.ProximalDendrite = ProximalDendrite.Deserialize(sr);
}
else if (data == ser.ReadBegin(nameof(Cell)))
{
column.Cells = ser.DeserializeCellArray(data, sr);
}
else if (data == ser.ReadEnd(nameof(Column)))
{
break;
}
else
{
string[] str = data.Split(HtmSerializer2.ParameterDelimiter);
for (int i = 0; i < str.Length; i++)
{
switch (i)
{
case 0:
{
column.CellId = ser.ReadIntValue(str[i]);
break;
}
case 1:
{
column.Index = ser.ReadIntValue(str[i]);
break;
}
default:
{ break; }
}
}
}
}
return(column);
}
public static Synapse Deserialize(StreamReader sr)
{
Synapse synapse = new Synapse();
HtmSerializer2 ser = new HtmSerializer2();
while (sr.Peek() >= 0)
{
string data = sr.ReadLine();
if (data == ser.LineDelimiter || data == ser.ReadBegin(nameof(Synapse)))
{
continue;
}
else if (data == ser.ReadBegin(nameof(Integer)))
{
synapse.BoxedIndex = Integer.Deserialize(sr);
}
else if (data == ser.ReadEnd(nameof(Synapse)))
{
break;
}
else
{
string[] str = data.Split(HtmSerializer2.ParameterDelimiter);
for (int i = 0; i < str.Length; i++)
{
switch (i)
{
case 0:
{
synapse.SourceCell = new Cell();
synapse.SourceCell.Index = ser.ReadIntValue(str[i]);
break;
}
case 1:
{
synapse.SegmentIndex = ser.ReadIntValue(str[i]);
break;
}
case 2:
{
synapse.SynapseIndex = ser.ReadIntValue(str[i]);
break;
}
case 3:
{
synapse.InputIndex = ser.ReadIntValue(str[i]);
break;
}
case 4:
{
synapse.Permanence = ser.ReadDoubleValue(str[i]);
break;
}
case 5:
{
synapse.IsDestroyed = ser.ReadBoolValue(str[i]);
break;
}
default:
{ break; }
}
}
}
}
return(synapse);
}
/// <summary>
/// Deserializes the cell from the stream.
/// </summary>
/// <param name="sr"></param>
/// <returns></returns>
public static Cell Deserialize(StreamReader sr)
{
Cell cell = new Cell();
HtmSerializer2 ser = new HtmSerializer2();
while (sr.Peek() >= 0)
{
string data = sr.ReadLine();
if (data == String.Empty || data == ser.ReadBegin(nameof(Cell)))
{
continue;
}
else if (data == ser.ReadEnd(nameof(Cell)))
{
break;
}
else
{
string[] str = data.Split(HtmSerializer2.ParameterDelimiter);
for (int i = 0; i < str.Length; i++)
{
switch (i)
{
case 0:
{
cell.Index = ser.ReadIntValue(str[i]);
break;
}
case 1:
{
cell.CellId = ser.ReadIntValue(str[i]);
break;
}
case 2:
{
cell.ParentColumnIndex = ser.ReadIntValue(str[i]);
break;
}
case 3:
{
int[] vs = ser.ReadArrayInt(str[i]);
cell.DistalDendrites = new List <DistalDendrite>();
for (int j = 0; j < vs.Count(); j++)
{
cell.DistalDendrites.Add(new DistalDendrite());
cell.DistalDendrites[j].Ordinal = vs[j];
using (StreamReader swLD = new StreamReader($"ser_SerializeDistalDendrite_{cell.DistalDendrites[j].Ordinal}.txt"))
{
cell.DistalDendrites[j] = DistalDendrite.Deserialize(swLD);
}
}
break;
}
case 4:
{
int[] vs = ser.ReadArrayInt(str[i]);
cell.ReceptorSynapses = new List <Synapse>();
for (int j = 0; j < vs.Count(); j++)
{
cell.ReceptorSynapses.Add(new Synapse());
cell.ReceptorSynapses[j].SynapseIndex = vs[j];
using (StreamReader swLS = new StreamReader($"ser_SerializeSynapseTest_{cell.ReceptorSynapses[j].SynapseIndex}.txt"))
{
cell.ReceptorSynapses[j] = Synapse.Deserialize(swLS);
}
}
break;
}
default:
{ break; }
}
}
}
}
return(cell);
}