Beispiel #1
0
        public void Cod1100784AtomCount()
        {
            var       ins       = ResourceLoader.GetAsStream(GetType(), "1100784.cif");
            CIFReader cifReader = new CIFReader(ins);
            var       chemFile  = cifReader.Read(new ChemFile());
            ICrystal  crystal   = chemFile[0][0].Crystal;

            Assert.AreEqual(72, crystal.Atoms.Count);
            cifReader.Close();
        }
Beispiel #2
0
        public void Cod1100784AtomCount()
        {
            var ins = ResourceLoader.GetAsStream(GetType(), "1100784.cif");

            using (var cifReader = new CIFReader(ins))
            {
                var chemFile = cifReader.Read(CDK.Builder.NewChemFile());
                var crystal  = chemFile[0][0].Crystal;
                Assert.AreEqual(72, crystal.Atoms.Count);
            }
        }
Beispiel #3
0
        public void Cod1100784CellLengths()
        {
            var       ins       = ResourceLoader.GetAsStream(GetType(), "1100784.cif");
            CIFReader cifReader = new CIFReader(ins);
            var       chemFile  = cifReader.Read(new ChemFile());
            ICrystal  crystal   = chemFile[0][0].Crystal;

            Assert.IsTrue(Math.Abs(crystal.A.Length() - 10.9754) < 1E-5);
            Assert.IsTrue(Math.Abs(crystal.B.Length() - 11.4045) < 1E-5);
            Assert.IsTrue(Math.Abs(crystal.C.Length() - 12.9314) < 1E-5);
            cifReader.Close();
        }
Beispiel #4
0
        public void Cod1100784()
        {
            var ins = ResourceLoader.GetAsStream(GetType(), "1100784.cif");

            using (var cifReader = new CIFReader(ins))
            {
                var chemFile = cifReader.Read(CDK.Builder.NewChemFile());
                Assert.AreEqual(1, chemFile.Count);
                Assert.AreEqual(1, chemFile[0].Count);
                Assert.IsNotNull(chemFile[0][0].Crystal);
            }
        }
Beispiel #5
0
        public void Cod1100784()
        {
            var       ins       = ResourceLoader.GetAsStream(GetType(), "1100784.cif");
            CIFReader cifReader = new CIFReader(ins);
            //        try {
            var chemFile = cifReader.Read(new ChemFile());

            Assert.AreEqual(1, chemFile.Count);
            Assert.AreEqual(1, chemFile[0].Count);
            Assert.IsNotNull(chemFile[0][0].Crystal);
            //        } finally {
            cifReader.Close();
            //        }
        }
Beispiel #6
0
        public void Cod1100784CellAngles()
        {
            var       ins       = ResourceLoader.GetAsStream(GetType(), "1100784.cif");
            CIFReader cifReader = new CIFReader(ins);
            var       chemFile  = cifReader.Read(new ChemFile());
            ICrystal  crystal   = chemFile[0][0].Crystal;
            Vector3   a         = crystal.A;
            Vector3   b         = crystal.B;
            Vector3   c         = crystal.C;
            double    alpha     = Math.Acos(Vector3.Dot(b, c) / (b.Length() * c.Length())) * 180 / Math.PI;
            double    beta      = Math.Acos(Vector3.Dot(c, a) / (c.Length() * a.Length())) * 180 / Math.PI;
            double    gamma     = Math.Acos(Vector3.Dot(a, b) / (a.Length() * b.Length())) * 180 / Math.PI;

            Assert.IsTrue(Math.Abs(alpha - 109.1080) < 1E-5);
            Assert.IsTrue(Math.Abs(beta - 98.4090) < 1E-5);
            Assert.IsTrue(Math.Abs(gamma - 102.7470) < 1E-5);
            cifReader.Close();
        }
Beispiel #7
0
        public void Cod1100784CellAngles()
        {
            var ins = ResourceLoader.GetAsStream(GetType(), "1100784.cif");

            using (var cifReader = new CIFReader(ins))
            {
                var chemFile = cifReader.Read(CDK.Builder.NewChemFile());
                var crystal  = chemFile[0][0].Crystal;
                var a        = crystal.A;
                var b        = crystal.B;
                var c        = crystal.C;
                var alpha    = Math.Acos(Vector3.Dot(b, c) / (b.Length() * c.Length())) * 180 / Math.PI;
                var beta     = Math.Acos(Vector3.Dot(c, a) / (c.Length() * a.Length())) * 180 / Math.PI;
                var gamma    = Math.Acos(Vector3.Dot(a, b) / (a.Length() * b.Length())) * 180 / Math.PI;
                Assert.IsTrue(Math.Abs(alpha - 109.1080) < 1E-5);
                Assert.IsTrue(Math.Abs(beta - 98.4090) < 1E-5);
                Assert.IsTrue(Math.Abs(gamma - 102.7470) < 1E-5);
            }
        }