/// <summary>
/// Adds some biomass for a species to the coarse roots pools at a site.
/// </summary>
public static void AddLiveCoarseRoots(double abovegroundWoodyBiomass,
//double leafLongevity,
ISpecies species,
ActiveSite site,
Pool coarseRoots)
{
double leafLongevity = SpeciesData.LeafLongevity[species];
double coarseRootBiomass = CalculateCoarseRoot(abovegroundWoodyBiomass, leafLongevity);
double inputPercentC = SpeciesData.WoodFractionC[species];
double inputPercentN = SpeciesData.WoodFractionN[species];
double inputPercentP = SpeciesData.WoodFractionP[species];
coarseRoots.AddMass(coarseRootBiomass, inputPercentC, inputPercentN, inputPercentP);
}
//---------------------------------------------------------------------
/// <summary>
/// Adds some biomass for a species to the fine roots pools at a site.
/// </summary>
public static void AddLiveFineRoots(double abovegroundLeafBiomass,
//double leafLongevity,
ISpecies species,
ActiveSite site,
Pool fineRoots)
{
double leafLongevity = SpeciesData.LeafLongevity[species];
double fineRootBiomass = CalculateFineRoot(abovegroundLeafBiomass, leafLongevity);
double inputPercentC = SpeciesData.FRootFractionC[species];
double inputPercentN = SpeciesData.FRootFractionN[species];
double inputPercentP = SpeciesData.FRootFractionP[species];
fineRoots.AddMass(fineRootBiomass, inputPercentC,
inputPercentN, inputPercentP);
}
//---------------------------------------------------------------------
private InitialBiomass(SiteCohorts cohorts,
List<PoolD> litterPool,
PoolD woodyDebrisPool,
List<PoolD> deadFRootsPool,
Pool fineRootsPool,
Pool coarseRootsPool,
Charcoal charcoalPool)
{
this.cohorts = cohorts;
this.litterPool = litterPool;
this.woodyDebrisPool = woodyDebrisPool;
this.deadFRootsPool = deadFRootsPool;
this.fineRootsPool = fineRootsPool;
this.coarseRootsPool = coarseRootsPool;
this.charcoalPool = charcoalPool;
}
//---------------------------------------------------------------------
/// <summary>
/// Initializes the module.
/// </summary>
public static void Initialize()
{
cohorts = Model.Core.Landscape.NewSiteVar<SiteCohorts>();
availableN = Model.Core.Landscape.NewSiteVar<double>();
unavailable = Model.Core.Landscape.NewSiteVar<Pool>();
fineRoots = Model.Core.Landscape.NewSiteVar<Pool>();
coarseRoots = Model.Core.Landscape.NewSiteVar<Pool>();
woodyDebris = Model.Core.Landscape.NewSiteVar<PoolD>();
litter = Model.Core.Landscape.NewSiteVar<List<PoolD>>();
deadFineRoots = Model.Core.Landscape.NewSiteVar<List<PoolD>>();
litterAdd = Model.Core.Landscape.NewSiteVar<List<PoolD>>();
deadFineRootsAdd = Model.Core.Landscape.NewSiteVar<List<PoolD>>();
removeLitter = Model.Core.Landscape.NewSiteVar<List<PoolD>>();
removeDeadFineRoots = Model.Core.Landscape.NewSiteVar<List<PoolD>>();
soilOrganicMatter = Model.Core.Landscape.NewSiteVar<SoilOrganicMatter>();
mineralSoil = Model.Core.Landscape.NewSiteVar<MineralSoil>();
charcoal = Model.Core.Landscape.NewSiteVar<Charcoal>();
rock = Model.Core.Landscape.NewSiteVar<Rock>();
//fireSeverity = Model.Core.Landscape.NewSiteVar<int>();
TotalWoodBiomass = Model.Core.Landscape.NewSiteVar<double>();
CurrentYearMortality = Model.Core.Landscape.NewSiteVar<double>();
PrevYearMortality = Model.Core.Landscape.NewSiteVar<double>();
//fireSeverity = Model.Core.GetSiteVar<byte>("Fire.Severity");
// Enable interactions with (almost) any fire extension:
/*if (Model.Core.GetSiteVar<int>("Fire.Severity") == null)
{
Console.Write("Fire Severity not cu");
}
else
{
Console.Write("Real value");
fireSeverity = Model.Core.GetSiteVar<int>("Fire.SeverityX");
}*/
foreach (ActiveSite site in Model.Core.Landscape)
{
// site cohorts are initialized by the PlugIn.InitializeSite method
availableN[site] = new double();
unavailable[site] = new Pool();
fineRoots[site] = new Pool();
coarseRoots[site] = new Pool();
woodyDebris[site] = new PoolD();
litter[site] = new List<PoolD>();
deadFineRoots[site] = new List<PoolD>();
litterAdd[site] = new List<PoolD>();
deadFineRootsAdd[site] = new List<PoolD>();
removeLitter[site] = new List<PoolD>();
removeDeadFineRoots[site] = new List<PoolD>();
soilOrganicMatter[site] = new SoilOrganicMatter();
mineralSoil[site] = new MineralSoil();
charcoal[site] = new Charcoal();
rock[site] = new Rock();
}
}
//---------------------------------------------------------------------
/// <summary>
/// Reduces the fine root's biomass and nutrients by a specified amount.
/// </summary>
public static void ReduceFineRoots(double amount,
ISpecies species,
Pool fineRoots)
{
fineRoots.Mass -= amount;
fineRoots.ContentC -= (amount * SpeciesData.FRootFractionC[species]);
fineRoots.ContentN -= (amount * SpeciesData.FRootFractionN[species]);
fineRoots.ContentP -= (amount * SpeciesData.FRootFractionP[species]);
}
//---------------------------------------------------------------------
/// <summary>
/// Reduces the coarse root's biomass and nutrients by a specified amount.
/// </summary>
public static void ReduceCoarseRoots(double amount,
ISpecies species,
Pool coarseRoots)
{
coarseRoots.Mass -= amount;
coarseRoots.ContentC -= (amount * SpeciesData.WoodFractionC[species]);
coarseRoots.ContentN -= (amount * SpeciesData.WoodFractionN[species]);
coarseRoots.ContentP -= (amount * SpeciesData.WoodFractionP[species]);
}
