private void Display3D()
{
int[] ListPos = new int[3];
ListPos[0] = 0;
ListPos[1] = 0;
ListPos[2] = 0;
if (CurrentWorld == null)
{
CurrentWorld = new c3DWorld(Parent.NewWorld.Dimensions, new cPoint3D(1,1,1), this.renderWindowControlFor3D, ListPos, CompleteScreening);
}
CurrentWorld.ren1.RemoveAllViewProps();
foreach (var CurrentCell in Parent.NewWorld.ListCells)
{
c3DSphere CurrentSphere = CurrentCell.Get3DObj();
if (Parent.ListClusteringAlgo.GetListParams("3D").GetListValuesParam().ListCheckValues.Get("checkBoxDisplayText").Value)
CurrentSphere.AddText(CurrentCell.Type.Name,CurrentWorld,2,CurrentCell.Type.TypeColor);
if (Parent.ListClusteringAlgo.GetListParams("3D").GetListValuesParam().ListCheckValues.Get("checkBoxDisplayCellPath").Value)
{
for (int Memory = 0; Memory < CurrentCell.PreviousStates.Count-1; Memory++)
{
c3DLine NewLineForMemory = new c3DLine(CurrentCell.PreviousStates[Memory].CentroidPosition,CurrentCell.PreviousStates[Memory + 1].CentroidPosition);
NewLineForMemory.Colour = CurrentCell.Type.TypeColor;
CurrentWorld.AddGeometric3DObject(NewLineForMemory);
}
c3DLine NewLineForMemoryFinal = new c3DLine(CurrentCell.PreviousStates[CurrentCell.PreviousStates.Count - 1].CentroidPosition,
CurrentCell.CentroidPosition);
NewLineForMemoryFinal.Colour = CurrentCell.Type.TypeColor;
CurrentWorld.AddGeometric3DObject(NewLineForMemoryFinal);
}
CurrentWorld.AddGeometric3DObject(CurrentSphere);
// CurrentSphere.Colour = CurrentCell.Type.TypeColor;
}
CurrentWorld.DisplayBottom(Color.White);
CurrentWorld.Render();
}
public void AddText(String Text, c3DWorld CurrentWorld, double scale)
{
if (TextActor == null)
{
TextActor = vtkFollower.New();
TextMapper = vtkPolyDataMapper.New();
TextVTK = vtkVectorText.New();
TextVTK.SetText(Text);
TextMapper.SetInputConnection(TextVTK.GetOutputPort());
TextActor.SetMapper(TextMapper);
//TextActor.SetPosition(this.GetActor().GetCenter()[0]-1, this.GetActor().GetCenter()[1]-1, this.GetActor().GetCenter()[2]-2);
TextActor.SetPosition(Position.X , Position.Y , Position.Z - 1);
TextActor.SetPickable(0);
CurrentWorld.ren1.AddActor(TextActor);
TextActor.SetCamera(CurrentWorld.ren1.GetActiveCamera());
}
else
{
TextVTK.SetText(Text);
}
TextActor.SetScale(scale);
}
// private cPoint3D Point2;
//private void CreateLine(cPoint3D Point1, cPoint3D Point2, Color Colour)
//{
// Position = new cPoint3D(Point1.X, Point1.Y, Point1.Z);
// Position = new cPoint3D(0, 0, 0);
// this.Colour = Colour;
// Line = vtkLineSource.New();
// this.Point1 = new cPoint3D(Point1.X, Point1.Y, Point1.Z);
// this.Point2 = new cPoint3D(Point2.X, Point2.Y, Point2.Z);
// Line.SetPoint1(Point1.X, Point1.Y, Point1.Z);
// Line.SetPoint2(Point2.X, Point2.Y, Point2.Z);
// vtk_PolyDataMapper = vtkPolyDataMapper.New();
// vtk_PolyDataMapper.SetInputConnection(Line.GetOutputPort());
// CreateVTK3DObject(0);
//}
public c3DText(c3DWorld CurrentWorld, string TextToDisplay, cPoint3D Position, Color Colour, double Scale)
{
// CreateLine(Point1, Point2, Colour);
vtkFollower TextActor = vtkFollower.New();
vtkPolyDataMapper TextMapper = vtkPolyDataMapper.New();
vtkVectorText TextVTK = vtkVectorText.New();
// double Dist = Point1.DistTo(Point2);
TextVTK.SetText(TextToDisplay);
TextMapper.SetInputConnection(TextVTK.GetOutputPort());
TextActor.SetMapper(TextMapper);
TextActor.SetPosition(Position.X, Position.Y, Position.Z);
TextActor.SetPickable(0);
TextActor.SetScale(Scale);
CurrentWorld.ren1.AddActor(TextActor);
TextActor.SetCamera(CurrentWorld.ren1.GetActiveCamera());
}
public void DisplayLenght(c3DWorld CurrentWorld, double scale)
{
vtkFollower TextActor = vtkFollower.New();
vtkPolyDataMapper TextMapper = vtkPolyDataMapper.New();
vtkVectorText TextVTK = vtkVectorText.New();
double Dist = Point1.DistTo(Point2);
TextVTK.SetText(Dist.ToString("N2"));
TextMapper.SetInputConnection(TextVTK.GetOutputPort());
TextActor.SetMapper(TextMapper);
TextActor.SetPosition(this.GetActor().GetCenter()[0], this.GetActor().GetCenter()[1], this.GetActor().GetCenter()[2]);
TextActor.SetPickable(0);
TextActor.SetScale(scale);
CurrentWorld.ren1.AddActor(TextActor);
TextActor.SetCamera(CurrentWorld.ren1.GetActiveCamera());
}
public void DisplayXYZ()
{
if (CompleteScreening == null) return;
int DescX = this.comboBoxDescriptorX.SelectedIndex;
int DescY = this.comboBoxDescriptorY.SelectedIndex;
int DescZ = this.comboBoxDescriptorZ.SelectedIndex;
if (DescX < 0) DescX = 0;
if (DescY < 0) DescY = 0;
if (DescZ < 0) DescZ = 0;
int[] Pos = new int[2];
Pos[0] = 0;
Pos[1] = 0;
if (CurrentWorld == null)
{
CurrentWorld = new c3DWorld(new cPoint3D(1000, 1000, 1000), new cPoint3D(ListScales[DescX], ListScales[DescY], ListScales[DescZ]), this.renderWindowControl1, Pos, CompleteScreening);
}
CurrentWorld.SetBackgroundColor(Color.Black);
CurrentWorld.ren1.RemoveAllViewProps();
// if (widget != null) widget.SetEnabled(0);
Series CurrentSeries = new Series("ScatterPoints");
double MinX = double.MaxValue;
double MinY = double.MaxValue;
double MinZ = double.MaxValue;
double MaxZ = double.MinValue;
double MaxX = double.MinValue;
double MaxY = double.MinValue;
double TempX, TempY, TempZ;
int Idx = 0;
cExtendPlateList ListPlate = new cExtendPlateList();
cMetaBiologicalObjectList ListMeta = new cMetaBiologicalObjectList("Test");
cBiologicalSpot CurrentSpot1 = new cBiologicalSpot(Color.White, new cPoint3D(0, 0, 0), 1, 4);
cMetaBiologicalObject Plate3D = new cMetaBiologicalObject("Data", ListMeta, CurrentSpot1);
if (!IsFullScreen)
ListPlate.Add(CompleteScreening.GetCurrentDisplayPlate());
else
ListPlate = CompleteScreening.ListPlatesActive;
vtkUnsignedCharArray colors = vtkUnsignedCharArray.New();
colors.SetName("colors");
colors.SetNumberOfComponents(3);
vtkPoints Allpoints = vtkPoints.New();
cExtendedList ListPtX = new cExtendedList();
cExtendedList ListPtY = new cExtendedList();
cExtendedList ListPtZ = new cExtendedList();
for (int i = 0; i < ListPlate.Count; i++)
{
cPlate CurrentPlate = ListPlate[i];
for (int IdxValue = 0; IdxValue < CompleteScreening.Columns; IdxValue++)
for (int IdxValue0 = 0; IdxValue0 < CompleteScreening.Rows; IdxValue0++)
{
cWell TmpWell = CurrentPlate.GetWell(IdxValue, IdxValue0, true);
if (TmpWell != null)
{
TempX = TmpWell.ListDescriptors[DescX].GetValue();
if (TempX < MinX) MinX = TempX;
if (TempX > MaxX) MaxX = TempX;
TempY = TmpWell.ListDescriptors[DescY].GetValue();
if (TempY < MinY) MinY = TempY;
if (TempY > MaxY) MaxY = TempY;
TempZ = TmpWell.ListDescriptors[DescZ].GetValue();
if (TempZ < MinZ) MinZ = TempZ;
if (TempZ > MaxZ) MaxZ = TempZ;
// cBiologicalSpot CurrentSpot = new cBiologicalSpot(TmpWell.GetColor(), new cPoint3D(TempX, TempY, TempZ), 1, 4);
List<char> Col = new List<char>();
Col.Add((char)(TmpWell.GetColor().R));
Col.Add((char)(TmpWell.GetColor().G));
Col.Add((char)(TmpWell.GetColor().B));
// IntPtr unmanagedPointer = Marshal.UnsafeAddrOfPinnedArrayElement(Col.ToArray(), 0);
//colors.InsertNextTupleValue(unmanagedPointer);
colors.InsertNextTuple3(Col[0], Col[1], Col[2]);
ListPtX.Add(TempX);
ListPtY.Add(TempY);
ListPtZ.Add(TempZ);
// CurrentSpot.Name = TmpWell.AssociatedPlate.Name + " - " + TmpWell.GetPosX() + "x" + TmpWell.GetPosY() + " :" + TmpWell.Name;
// CurrentSpot.ObjectType = TmpWell.AssociatedPlate.Name + " - " + TmpWell.GetPosX() + "x" + TmpWell.GetPosY() + " :" + TmpWell.Name;
// Plate3D.AddObject(CurrentSpot);
// CurrentWorld.AddBiological3DObject(CurrentSpot);
//CurrentSeries.Points.Add(TempX, TempY);
// if (IsFullScreen)
// CurrentSeries.Points[Idx].ToolTip = TmpWell.AssociatedPlate.Name + "\n" + TmpWell.GetPosX() + "x" + TmpWell.GetPosY() + " :" + TmpWell.Name;
// else
// CurrentSeries.Points[Idx].ToolTip = TmpWell.GetPosX() + "x" + TmpWell.GetPosY() + " :" + TmpWell.Name;
Idx++;
}
}
}
double MinValueX = ListPtX.Min();
double MaxValueX = ListPtX.Max();
cExtendedList NormX = ListPtX.Normalize(MinValueX, MaxValueX);
double MinValueY = ListPtY.Min();
double MaxValueY = ListPtY.Max();
cExtendedList NormY = ListPtY.Normalize(MinValueY, MaxValueY);
double MinValueZ = ListPtZ.Min();
double MaxValueZ = ListPtZ.Max();
cExtendedList NormZ = ListPtZ.Normalize(MinValueZ, MaxValueZ);
for (int IdxPt = 0; IdxPt < ListPtX.Count; IdxPt++)
Allpoints.InsertNextPoint(NormX[IdxPt], NormY[IdxPt], NormZ[IdxPt]);
vtkPolyData polydata = vtkPolyData.New();
polydata.SetPoints(Allpoints);
polydata.GetPointData().SetScalars(colors);
vtkSphereSource SphereSource = vtkSphereSource.New();
SphereSource.SetRadius(RadiusSphere);
vtkGlyph3D glyph3D = vtkGlyph3D.New();
glyph3D.SetColorModeToColorByScalar();
glyph3D.SetSourceConnection(SphereSource.GetOutputPort());
glyph3D.SetInput(polydata);
glyph3D.ScalingOff();
glyph3D.Update();
vtkPolyDataMapper mapper = vtkPolyDataMapper.New();
mapper.SetInputConnection(glyph3D.GetOutputPort());
vtkActor actor = vtkActor.New();
actor.SetMapper(mapper);
CurrentWorld.ren1.AddActor(actor);
if ((CompleteScreening.GetCurrentDisplayPlate().ListDRCRegions != null) && (CompleteScreening.GlobalInfo.OptionsWindow.checkBoxConnectDRCPts.Checked))
{
foreach (cDRC_Region TmpRegion in CompleteScreening.GetCurrentDisplayPlate().ListDRCRegions)
{
int cpt = 0;
cWell[][] ListWells = TmpRegion.GetListWells();
foreach (cWell[] item in ListWells)
{
for (int IdxWell = 0; IdxWell < item.Length - 1; IdxWell++)
{
//cWell TmpWell0 = CompleteScreening.GetCurrentDisplayPlate().GetWell(item[IdxWell], IdxValue0, true);
if ((item[IdxWell] != null) && (item[IdxWell + 1] != null) && (item[IdxWell].GetClass() >= -1))
{
double StartX = (item[IdxWell].ListDescriptors[DescX].GetValue() - MinValueX) / (MaxValueX - MinValueX);
double StartY = (item[IdxWell].ListDescriptors[DescY].GetValue() - MinValueY) / (MaxValueY - MinValueY);
double StartZ = (item[IdxWell].ListDescriptors[DescZ].GetValue() - MinValueZ) / (MaxValueZ - MinValueZ);
double EndX = (item[IdxWell + 1].ListDescriptors[DescX].GetValue() - MinValueX) / (MaxValueX - MinValueX);
double EndY = (item[IdxWell + 1].ListDescriptors[DescY].GetValue() - MinValueY) / (MaxValueY - MinValueY);
double EndZ = (item[IdxWell + 1].ListDescriptors[DescZ].GetValue() - MinValueZ) / (MaxValueZ - MinValueZ);
cPoint3D StartPt = new cPoint3D(StartX, StartY, StartZ);
cPoint3D EndPt = new cPoint3D(EndX, EndY, EndZ);
c3DLine NewLine = new c3DLine(StartPt, EndPt);
CurrentWorld.AddGeometric3DObject(NewLine);
}
}
}
/*List<cDRC> ListDRC = new List<cDRC>();
for (int i = 0; i < CompleteScreening.ListDescriptors.Count; i++)
{
if (CompleteScreening.ListDescriptors[i].IsActive())
{
cDRC CurrentDRC = new cDRC(TmpRegion, CompleteScreening.ListDescriptors[i]);
ListDRC.Add(CurrentDRC);
cpt++;
}
}
*/
//cDRCDisplay DRCDisplay = new cDRCDisplay(ListDRC, GlobalInfo);
//if (DRCDisplay.CurrentChart.Series.Count == 0) continue;
//DRCDisplay.CurrentChart.Location = new Point((DRCDisplay.CurrentChart.Width + 50) * 0, (DRCDisplay.CurrentChart.Height + 10 + DRCDisplay.CurrentRichTextBox.Height) * h++);
//DRCDisplay.CurrentRichTextBox.Location = new Point(DRCDisplay.CurrentChart.Location.X, DRCDisplay.CurrentChart.Location.Y + DRCDisplay.CurrentChart.Height + 5);
//WindowforDRCsDisplay.LChart.Add(DRCDisplay.CurrentChart);
//WindowforDRCsDisplay.LRichTextBox.Add(DRCDisplay.CurrentRichTextBox);
}
}
// vtkAxesActor axis = vtkAxesActor.New();
vtkAxisActor axisX = vtkAxisActor.New();
axisX.SetPoint1(0, 0, 0);
axisX.SetPoint2(1, 0, 0);
axisX.SetTickLocationToBoth();
axisX.SetDeltaMajor(0.1);
axisX.SetMajorTickSize(0);
axisX.MinorTicksVisibleOff();
//axisX.Maj
CurrentWorld.ren1.AddActor(axisX);
vtkAxisActor axisY = vtkAxisActor.New();
axisY.SetPoint1(0, 0, 0);
axisY.SetPoint2(0, 1, 0);
axisY.SetTickLocationToBoth();
axisY.SetDeltaMajor(0.1);
axisY.SetMajorTickSize(0.05);
axisY.MinorTicksVisibleOff();
CurrentWorld.ren1.AddActor(axisY);
vtkAxisActor axisZ = vtkAxisActor.New();
axisZ.SetPoint1(0, 0, 0);
axisZ.SetPoint2(0, 0, 1);
axisZ.SetTickLocationToBoth();
axisZ.SetDeltaMajor(0.1);
axisZ.SetMajorTickSize(0.05);
axisZ.MinorTicksVisibleOff();
CurrentWorld.ren1.AddActor(axisZ);
if (widget == null)
{
widget = vtkOrientationMarkerWidget.New();
axes = vtkAxesActor.New();
widget.SetOutlineColor(0.9300, 0.5700, 0.1300);
widget.SetInteractor(CurrentWorld.iren);
widget.SetViewport(0.0, 0.0, 0.4, 0.4);
widget.SetEnabled(0);
// widget.InteractiveOn();
if (this.comboBoxDescriptorX.SelectedItem == null)
axes.SetXAxisLabelText(this.comboBoxDescriptorX.Items[0].ToString());
else
axes.SetXAxisLabelText(this.comboBoxDescriptorX.SelectedItem.ToString());
if (this.comboBoxDescriptorY.SelectedItem == null)
axes.SetYAxisLabelText(this.comboBoxDescriptorY.Items[0].ToString());
else
axes.SetYAxisLabelText(this.comboBoxDescriptorY.SelectedItem.ToString());
if (this.comboBoxDescriptorZ.SelectedItem == null)
axes.SetZAxisLabelText(this.comboBoxDescriptorZ.Items[0].ToString());
else
axes.SetZAxisLabelText(this.comboBoxDescriptorZ.SelectedItem.ToString());
widget.SetOrientationMarker(axes);
}
else
{
if(this.comboBoxDescriptorX.SelectedItem!=null)
axes.SetXAxisLabelText(this.comboBoxDescriptorX.SelectedItem.ToString());
if (this.comboBoxDescriptorY.SelectedItem != null)
axes.SetYAxisLabelText(this.comboBoxDescriptorY.SelectedItem.ToString());
if (this.comboBoxDescriptorZ.SelectedItem != null)
axes.SetZAxisLabelText(this.comboBoxDescriptorZ.SelectedItem.ToString());
widget.SetOrientationMarker(axes);
}
//
//vtkCameraWidget Wid = vtkCameraWidget.New();
//Wid.SetInteractor(CurrentWorld.iren);
//Wid.SetEnabled(1);
// Wid.InteractiveOn();
//vtkDistanceWidget distanceWidget = vtkDistanceWidget.New();
//distanceWidget.SetInteractor(CurrentWorld.iren);
//distanceWidget.SetEnabled(1);
//distanceWidget.CreateDefaultRepresentation();
//((vtkDistanceRepresentation)distanceWidget.GetRepresentation()).SetLabelFormat("%-#6.3g mm");
/*static_cast<vtkDistanceRepresentation*>(distanceWidget->GetRepresentation())
->SetLabelFormat("%-#6.3g mm");
*/
// Plate3D.GenerateAndDisplayBoundingBox(1, Color.White, false, CurrentWorld);
//c3DText CaptionX = new c3DText(CurrentWorld, CompleteScreening.ListDescriptors[DescX].GetName(), new cPoint3D(MaxX, MinY, MinZ), Color.DarkRed, this.FontSize);
//c3DLine LineX = new c3DLine(new cPoint3D(MinX, MinY, MinZ), new cPoint3D(MaxX, MinY, MinZ), Color.DarkRed);
//CurrentWorld.AddGeometric3DObject(LineX);
//c3DText CaptionY = new c3DText(CurrentWorld, CompleteScreening.ListDescriptors[DescY].GetName(), new cPoint3D(MinX, MaxY, MinZ), Color.DarkGreen, this.FontSize);
//c3DLine LineY = new c3DLine(new cPoint3D(MinX, MinY, MinZ), new cPoint3D(MinX, MaxY, MinZ), Color.DarkGreen);
//CurrentWorld.AddGeometric3DObject(LineY);
//c3DText CaptionZ = new c3DText(CurrentWorld, CompleteScreening.ListDescriptors[DescZ].GetName(), new cPoint3D(MinX, MinY, MaxZ), Color.DarkBlue, this.FontSize);
//c3DLine LineZ = new c3DLine(new cPoint3D(MinX, MinY, MinZ), new cPoint3D(MinX, MinY, MaxZ), Color.DarkBlue);
//CurrentWorld.AddGeometric3DObject(LineZ);
CurrentWorld.SimpleRender();// Render();
}
public void AddText(String Text, c3DWorld CurrentWorld, double scale, Color colour)
{
AddText(Text, CurrentWorld, scale);
TextActor.GetProperty().SetColor(Colour.R / 255.0, Colour.G / 255.0, Colour.B / 255.0);
}
//public void AddPointingArrow(double scale, Color Colour)
//{
// vtkArrowSource ArrowSource = vtkArrowSource.New();
// ArrowActor = vtkActor.New();
// vtkPolyDataMapper ArrowMapper = vtkPolyDataMapper.New();
// ArrowMapper.SetInputConnection(ArrowSource.GetOutputPort());
// ArrowActor.SetMapper(ArrowMapper);
// ArrowActor.SetPosition(Position.X - 6, Position.Y - 0, Position.Z - 6);
// ArrowActor.RotateY(-45);
// ArrowActor.SetScale(scale);
// ArrowActor.SetPickable(0);
// Color C = Color.MediumPurple;
// ArrowActor.GetProperty().SetColor(Colour.R / 255.0, Colour.G / 255.0, Colour.G / 255.0);
// // CreateVTK3DObject();
// // CurrentWorld.ren1.AddActor(ArrowActor);
//}
//public void AddPointingArrow(double scale)
//{
// AddPointingArrow(scale, Color.White);
//}
public void DisplayCentroid(c3DWorld CurrentWorld, double scale)
{
if (SphereActor == null)
{
vtkSphereSource SphereSource = vtkSphereSource.New();
vtkPolyDataMapper SphereMapper = vtkPolyDataMapper.New();
SphereActor = vtkActor.New();
SphereMapper = vtkPolyDataMapper.New();
SphereMapper.SetInputConnection(SphereSource.GetOutputPort());
SphereActor.SetMapper(SphereMapper);
double[] CenterPos = vtk_Actor.GetCenter();
SphereActor.SetPosition(CenterPos[0], CenterPos[1], CenterPos[2]);
SphereActor.SetScale(scale);
SphereActor.SetPickable(0);
Color C = Color.YellowGreen;
SphereActor.GetProperty().SetColor(C.R / 255.0, C.G / 255.0, C.B / 255.0);
CurrentWorld.ren1.AddActor(SphereActor);
}
else
{
if (SphereActor.GetVisibility() == 0)
SphereActor.SetVisibility(1);
else
SphereActor.SetVisibility(0);
}
}
public void AddPointingArrow(c3DWorld CurrentWorld, double scale)
{
AddPointingArrow(CurrentWorld, scale, Color.White);
}
public void AddPointingArrow(c3DWorld CurrentWorld, double scale, Color Colour)
{
vtkArrowSource ArrowSource = vtkArrowSource.New();
ArrowActor = vtkActor.New();
vtkPolyDataMapper ArrowMapper = vtkPolyDataMapper.New();
ArrowMapper.SetInputConnection(ArrowSource.GetOutputPort());
ArrowActor.SetMapper(ArrowMapper);
ArrowActor.SetPosition(Position.X - 6, Position.Y - 0, Position.Z - 6);
ArrowActor.RotateY(-45);
ArrowActor.SetScale(scale);
ArrowActor.SetPickable(0);
Color C = Color.MediumPurple;
ArrowActor.GetProperty().SetColor(Colour.R / 255.0, Colour.G / 255.0, Colour.G / 255.0);
// CreateVTK3DObject();
CurrentWorld.ren1.AddActor(ArrowActor);
}