protected void OnFkpmLoad(object sender, EventArgs e)
{
if (MainData.FPKMFileNames.Count > 0)
{
List <PreSampleDefinition> prels = new List <PreSampleDefinition> ();
foreach (string st in MainData.FPKMFileNames)
{
List <string> cols = null;
FKPM.GetSampleNames(st, out cols);
int cnt = 0;
foreach (string ss in cols)
{
PreSampleDefinition pef = new PreSampleDefinition(SampleType.Expr);
pef.singleFName = st;
pef.singleColID = ss;
pef.singleColIndex = cnt + 9;
pef.IsGenotyped = false;
pef.TotalColumns = cols.Count;
prels.Add(pef);
cnt += 4;
}
}
SampleAllocationWindow swind = new SampleAllocationWindow(prels);
swind.ShowAll();
}
else
{
MainData.ShowMessageWindow("You need to add some files to load first!", false);
}
}
protected void OnVcfLoad(object sender, EventArgs e)
{
if (MainData.VariantFileNames.Count > 0)
{
List <PreSampleDefinition> prels = new List <PreSampleDefinition> ();
foreach (string st in MainData.VariantFileNames)
{
List <string> cols = null;
if (Variant.IsGenotyped(st, ref cols))
{
int cnt = 0;
foreach (string ss in cols)
{
PreSampleDefinition pef = new PreSampleDefinition(SampleType.Vcf);
pef.singleFName = st;
pef.singleColID = ss;
pef.singleColIndex = cnt + 9;
pef.IsGenotyped = true;
pef.TotalColumns = cols.Count;
prels.Add(pef);
cnt++;
}
}
else
{
PreSampleDefinition pef = new PreSampleDefinition(SampleType.Vcf);
pef.singleFName = st;
pef.IsGenotyped = false;
pef.TotalColumns = 0;
prels.Add(pef);
}
}
SampleAllocationWindow swind = new SampleAllocationWindow(prels);
swind.ShowAll();
}
else
{
MainData.ShowMessageWindow("You need to add some files to load first!", false);
}
}
protected void OnBamLoad(object sender, EventArgs e)
{
if (MainData.BAMFileNames.Count > 0)
{
List <PreSampleDefinition> prels = new List <PreSampleDefinition> ();
foreach (string st in MainData.BAMFileNames)
{
PreSampleDefinition pef = new PreSampleDefinition(SampleType.BAM);
pef.singleFName = st;
prels.Add(pef);
}
SampleAllocationWindow swind = new SampleAllocationWindow(prels);
swind.ShowAll();
}
else
{
MainData.ShowMessageWindow("You need to add some files to load first!", false);
}
}