/// <summary>
/// Sets the parents NET value based on the scan numbers observed in the children.
/// </summary>
public void setParentNetFromChildren(IqTarget target)
{
var children = target.ChildTargets();
var scanList = new List <int>();
foreach (IqChargeStateTarget chargeStateTarget in children)
{
scanList.Add(chargeStateTarget.ObservedScan);
}
scanList.Sort();
target.ElutionTimeTheor = Run.NetAlignmentInfo.GetNETValueForScan(scanList[scanList.Count / 2]);
}
/// <summary>
/// for cloning a IqTarget. Recursive
/// </summary>
/// <param name="target">Input the root target so all children will be cloned</param>
/// <returns></returns>
public IqTarget Clone(IqTarget target)
{
IqTarget tempTarget = new IqTargetBasic();
CopyTargetProperties(target, tempTarget);
//child targets
var childTargets = target.ChildTargets().ToList();
if (target.HasChildren() && childTargets.Count > 0)
{
foreach (var child in childTargets)
{
var clone = Clone(child);
clone.ParentTarget = target;
tempTarget.AddTarget(clone);
}
}
return(tempTarget);
}