public void Save(ImageAnalyser IA)
{
TifFileInfo tifFI = this.tifFI;
if (tifFI != null)
{
if (!tifFI.available)
{
MessageBox.Show("Image is not avaliable!\nTry again later.");
return;
}
string dir = tifFI.Dir;
//background worker
var bgw = new BackgroundWorker();
bgw.WorkerReportsProgress = true;
//Add handlers to the backgroundworker
//Reports when is finished
bgw.DoWork += new DoWorkEventHandler(delegate(Object o, DoWorkEventArgs a)
{
//check is the directory exist
if (dir.IndexOf("\\") > -1)
{
string checkDir = dir.Substring(0, dir.LastIndexOf("\\"));
checkDir = OSStringConverter.StringToDir(checkDir);
if (!System.IO.Directory.Exists(checkDir))
{
System.IO.Directory.CreateDirectory(checkDir);
}
}
//save file
FileEncoder.SaveTif(tifFI, dir, IA);
//report progress
((BackgroundWorker)o).ReportProgress(0);
});
bgw.ProgressChanged += new ProgressChangedEventHandler(delegate(Object o, ProgressChangedEventArgs a)
{
if (a.ProgressPercentage == 0)
{
Saved = true;
if (tifFI != null)
{
tifFI.available = true;
}
IA.FileBrowser.StatusLabel.Text = "Ready";
}
});
//Start background worker
tifFI.available = false;
IA.FileBrowser.StatusLabel.Text = "Saving Tif Image...";
IA.EnabletrackBars(false);
bgw.RunWorkerAsync();
//continue when the sae is done
while (bgw.IsBusy)
{
Application.DoEvents(); //This call is very important if you want to have a progress bar and want to update it
//from the Progress event of the background worker.
Thread.Sleep(10); //This call waits if the loop continues making sure that the CPU time gets freed before
//re-checking.
}
IA.EnabletrackBars(true);
}
else if (ResultsExtractor != null)
{
//check is the directory exist
if (dir.IndexOf("\\") > -1)
{
string checkDir = dir.Substring(0, dir.LastIndexOf("\\"));
checkDir = OSStringConverter.StringToDir(checkDir);
if (!System.IO.Directory.Exists(checkDir))
{
System.IO.Directory.CreateDirectory(checkDir);
}
}
var bgw = ResultsExtractor.FileSaver.SaveCTDataFile(
(Cell_Tool_3.ResultsExtractor.MyForm)
this.ResultsExtractor.myPanel, dir);
//continue when the sae is done
while (bgw.IsBusy)
{
Application.DoEvents(); //This call is very important if you want to have a progress bar and want to update it
//from the Progress event of the background worker.
Thread.Sleep(10); //This call waits if the loop continues making sure that the CPU time gets freed before
//re-checking.
}
}
}
private string calculateCTTagValue(TifFileInfo fi, ImageAnalyser IA)
{
List <string> vals = new List <string>();
string val = titleTB.Text + "\t" +
FiltersCB.Checked.ToString() + "\t" +
SegmentationCB.Checked.ToString() + "\t" +
SpotDetCB.Checked.ToString() + "\t" +
TrackingCB.Checked.ToString() + "\t" +
fi.sizeC + "\t" +
ChartAxisCB.Checked.ToString() + "\t" +
TimeStepCB.Checked.ToString();
vals.Add(val);
if (FiltersCB.Checked)
{
vals.Add("tracking_MaxSize->" + FileEncoder.TagValueToString(fi.tracking_MaxSize));
vals.Add("tracking_MinSize->" + FileEncoder.TagValueToString(fi.tracking_MinSize));
vals.Add("tracking_Speed->" + FileEncoder.TagValueToString(fi.tracking_Speed));
}
if (SegmentationCB.Checked)
{
vals.Add("SegmentationProtocol->" + FileEncoder.TagValueToString(fi.SegmentationProtocol));
vals.Add("SegmentationCBoxIndex->" + FileEncoder.TagValueToString(fi.SegmentationCBoxIndex));
vals.Add("thresholdsCBoxIndex->" + FileEncoder.TagValueToString(fi.thresholdsCBoxIndex));
vals.Add("RefSpotColor->" + FileEncoder.TagValueToString(fi.RefSpotColor));
vals.Add("sumHistogramChecked->" + FileEncoder.TagValueToString(fi.sumHistogramChecked));
vals.Add("thresholdColors->" + FileEncoder.TagValueToString(fi.thresholdColors));
vals.Add("RefThresholdColors->" + FileEncoder.TagValueToString(fi.RefThresholdColors));
vals.Add("thresholdValues->" + FileEncoder.TagValueToString(fi.thresholdValues));
vals.Add("thresholds->" + FileEncoder.TagValueToString(fi.thresholds));
}
if (SpotDetCB.Checked)
{
vals.Add("SelectedSpotThresh->" + FileEncoder.TagValueToString(fi.SelectedSpotThresh));
vals.Add("typeSpotThresh->" + FileEncoder.TagValueToString(fi.typeSpotThresh));
vals.Add("SpotThresh->" + FileEncoder.TagValueToString(fi.SpotThresh));
vals.Add("spotSensitivity->" + FileEncoder.TagValueToString(fi.spotSensitivity));
vals.Add("SpotColor->" + FileEncoder.TagValueToString(fi.SpotColor));
vals.Add("SpotTailType->" + string.Join("\t", fi.SpotTailType));
}
if (FiltersCB.Checked)
{
if (fi.newFilterHistory != null)
{
vals.Add("newFilters->" + FileEncoder.TagValueToString(fi.newFilterHistory));
}
//vals.Add("FilterHistory->" + FileEncoder.TagValueToString(fi.FilterHistory.ToArray()));
// if (fi.watershedList.Count!=0)
//vals.Add("watershed->" + string.Join("\n", fi.watershedList));
}
if (ChartAxisCB.Checked)
{
vals.Add("xAxisTB->" + fi.xAxisTB.ToString());
vals.Add("yAxisTB->" + fi.yAxisTB.ToString());
}
if (TimeStepCB.Checked)
{
vals.Add("TimeSteps->" + FileEncoder.TagValueToString(fi.TimeSteps));
}
return(string.Join(";\n", vals));
}
