/// <summary>
/// Adds a new sequence item to the UI
/// </summary>
/// <param name="sender">sender object</param>
/// <param name="e">Event arguments</param>
private void OnAddSequenceClick(object sender, RoutedEventArgs e)
{
InputSequenceItem tmpSequenceItem = new InputSequenceItem();
tmpSequenceItem.IsSequenceNameVisible = this.IsSequenceNameVisible;
// Load sequence label if one exists for current index
if (null != sequenceLabels)
{
if (sequenceLabels.Length > sequenceList.Children.Count)
{
tmpSequenceItem.SequenceLabel = sequenceLabels[sequenceList.Children.Count];
}
else
{
tmpSequenceItem.SequenceLabel = sequenceLabels[sequenceLabels.Length - 1];
}
}
tmpSequenceItem.RemoveItemClick += new RoutedEventHandler(OnRemoveItemClick);
tmpSequenceItem.RequestSelectionHelper += new RoutedEventHandler(OnRequestSelectionHelper);
tmpSequenceItem.IsUseMetadataCheckBoxVisible = this.isUseMetadataCheckBoxVisible;
tmpSequenceItem.UseMetadataSelected += new RoutedEventHandler(OnUseMetadataSelected);
sequenceList.Children.Add(tmpSequenceItem);
UpdateAddSequenceButton();
}
/// <summary>
/// Loads default values and minimum number of sequence items and so on
/// </summary>
public void Initialize()
{
// Set window title
if (IsSequenceRangeSelection)
{
windowHeader.Text = Resources[RESOURCESELECTINPUTSEQUENCERANGES].ToString();
sequenceConfigurationControls.Visibility = Visibility.Collapsed;
}
else
{
windowHeader.Text = Resources[RESOURCESELECTINPUTSEQUENCES].ToString();
sequenceConfigurationControls.Visibility = Visibility.Visible;
}
// populate molecule type combo box
this.moleculeTypeCombo.Items.Add(Properties.Resources.AutoDetectString);
IEnumerable <IAlphabet> moleculeTypes = Alphabets.All.OrderBy(alpha => alpha.Name);
foreach (IAlphabet alpha in moleculeTypes)
{
this.moleculeTypeCombo.Items.Add(alpha.Name);
}
this.moleculeTypeCombo.SelectedIndex = 0;
// Populate minimum number of sequence selection controls to the list.
InputSequenceItem tmpSequenceItem;
sequenceList.Children.Clear();
for (int i = 1; i <= minSequenceItems; i++)
{
tmpSequenceItem = new InputSequenceItem();
tmpSequenceItem.IsUseMetadataCheckBoxVisible = this.isUseMetadataCheckBoxVisible;
if (i == 1 && this.isUseMetadataCheckBoxVisible)
{
tmpSequenceItem.IsUseMetadataSelected = true;
}
tmpSequenceItem.UseMetadataSelected += new RoutedEventHandler(OnUseMetadataSelected);
if (sequenceLabels != null)
{
if (sequenceLabels.Length >= i)
{
tmpSequenceItem.SequenceLabel = sequenceLabels[i - 1];
}
}
tmpSequenceItem.IsRemoveItemVisible = false;
tmpSequenceItem.IsSequenceNameVisible = this.IsSequenceNameVisible;
tmpSequenceItem.sequenceAddressBox.TextChanged += new TextChangedEventHandler(OnSequenceAddressChanged);
tmpSequenceItem.RequestSelectionHelper += new RoutedEventHandler(OnRequestSelectionHelper);
sequenceList.Children.Add(tmpSequenceItem);
}
this.selectedSequenceItem = sequenceList.Children[0] as InputSequenceItem;
UpdateAddSequenceButton();
ValidateForBlankAddress();
}
/// <summary>
/// Adds a new sequence item to the UI
/// </summary>
/// <param name="sender">sender object</param>
/// <param name="e">Event arguments</param>
private void OnAddSequenceClick(object sender, RoutedEventArgs e)
{
InputSequenceItem tmpSequenceItem = new InputSequenceItem();
tmpSequenceItem.IsSequenceNameVisible = this.IsSequenceNameVisible;
tmpSequenceItem.IsMetadataVisible = this.IsMetadataVisible;
tmpSequenceItem.IsQualityScoresVisible = this.IsQualityScoresVisible;
tmpSequenceItem.RemoveItemClick += new RoutedEventHandler(OnRemoveItemClick);
tmpSequenceItem.RequestSelectionHelper += new RoutedEventHandler(OnRequestSelectionHelper);
sequenceList.Children.Add(tmpSequenceItem);
UpdateAddSequenceButton();
}
/// <summary>
/// Removes the selected sequence item
/// </summary>
/// <param name="sender">sender object</param>
/// <param name="e">Event arguments</param>
private void OnRemoveItemClick(object sender, RoutedEventArgs e)
{
InputSequenceItem tmpSequenceItem = sender as InputSequenceItem;
if (tmpSequenceItem != null)
{
tmpSequenceItem.UseMetadataSelected -= new RoutedEventHandler(OnUseMetadataSelected);
}
sequenceList.Children.Remove(sender as UIElement);
UpdateAddSequenceButton();
}
/// <summary>
/// Updates the InputSequenceItems so that at any given time 0 or 1 checkbox should be selected.
/// </summary>
/// <param name="sender"></param>
/// <param name="e"></param>
private void OnUseMetadataSelected(object sender, RoutedEventArgs e)
{
InputSequenceItem tmpSequenceItem = sender as InputSequenceItem;
if (tmpSequenceItem != null)
{
foreach (InputSequenceItem item in GetSequences())
{
if (item != tmpSequenceItem && item.IsUseMetadataSelected)
{
item.IsUseMetadataSelected = false;
}
}
}
}
/// <summary>
/// Loads default values and minimum number of sequence items and so on
/// </summary>
public void Initialize()
{
// Set window title
if (IsSequenceRangeSelection)
{
windowHeader.Text = Resources[RESOURCESELECTINPUTSEQUENCERANGES].ToString();
sequenceConfigurationControls.Visibility = Visibility.Collapsed;
}
else
{
windowHeader.Text = Resources[RESOURCESELECTINPUTSEQUENCES].ToString();
sequenceConfigurationControls.Visibility = Visibility.Visible;
}
// populate molecule type combo box
this.moleculeTypeCombo.Items.Add(Properties.Resources.AutoDetectString);
IEnumerable <IAlphabet> moleculeTypes = Alphabets.All.OrderBy(alpha => alpha.Name);
foreach (IAlphabet alpha in moleculeTypes)
{
this.moleculeTypeCombo.Items.Add(alpha.Name);
}
this.moleculeTypeCombo.SelectedIndex = 0;
// Populate minimum number of sequence selection controls to the list.
InputSequenceItem tmpSequenceItem;
sequenceList.Children.Clear();
tmpSequenceItem = new InputSequenceItem();
tmpSequenceItem.IsRemoveItemVisible = false;
tmpSequenceItem.IsSequenceNameVisible = this.IsSequenceNameVisible;
tmpSequenceItem.IsMetadataVisible = this.IsMetadataVisible;
tmpSequenceItem.IsQualityScoresVisible = this.IsQualityScoresVisible;
tmpSequenceItem.RequestSelectionHelper += new RoutedEventHandler(OnRequestSelectionHelper);
sequenceList.Children.Add(tmpSequenceItem);
this.selectedSequenceItem = sequenceList.Children[0] as InputSequenceItem;
UpdateAddSequenceButton();
}