public void TestGetLastArchivalDate()
{
var mainSettings = new MainSettings() { SkylineFilePath = @"C:\Dummy\path\Test_file.sky" };
var mainSettingsTab = new MainSettingsTab(null, null) {Settings = mainSettings};
var fsUtil = new TestFileSystemUtil();
Assert.AreEqual(new DateTime(2015, 06, 01), mainSettingsTab.GetLastArchivalDate(fsUtil));
}
public void TestAddArchiveArgs()
{
var mainSettings = new MainSettings() { SkylineFilePath = @"C:\Dummy\path\Test_file.sky" };
var mainSettingsTab = new MainSettingsTab(null, new TestLogger()) {Settings = mainSettings};
var date = new DateTime(2015, 6, 17);
mainSettingsTab.LastArchivalDate = date;
var args = mainSettingsTab.GetArchiveArgs(mainSettingsTab.LastArchivalDate, date);
Assert.IsNull(args);
Assert.AreEqual(date, mainSettingsTab.LastArchivalDate);
date = date.AddMonths(1); // 07/17/2015
var archiveArg = string.Format("--share-zip={0}", "Test_file_2015_06.sky.zip");
args = mainSettingsTab.GetArchiveArgs(mainSettingsTab.LastArchivalDate, date);
Assert.AreEqual(archiveArg, args);
Assert.AreEqual(date, mainSettingsTab.LastArchivalDate);
date = date.AddYears(1); // 06/17/2016
archiveArg = string.Format("--share-zip={0}", "Test_file_2015_07.sky.zip");
args = mainSettingsTab.GetArchiveArgs(mainSettingsTab.LastArchivalDate, date);
Assert.AreEqual(archiveArg, args);
Assert.AreEqual(date, mainSettingsTab.LastArchivalDate);
}
public void TestSkylineRunnerArgs()
{
const string skyFile = @"C:\Dummy\path\Test_file.sky";
const string dataFile1 = @"C:\Dummy\path\Test1.raw";
var logger = new TestLogger();
var mainSettings = new MainSettings()
{
SkylineFilePath = skyFile,
ResultsWindowString = MainSettings.ACCUM_TIME_WINDOW.ToString()
};
var mainSettingsTab = new MainSettingsTab(null, logger)
{
Settings = mainSettings
};
var accumulationWindow = MainSettingsTab.AccumulationWindow.Get(DateTime.Now, MainSettings.ACCUM_TIME_WINDOW);
Assert.AreEqual(accumulationWindow.EndDate.Subtract(accumulationWindow.StartDate).Days + 1,
MainSettings.ACCUM_TIME_WINDOW);
var expected =
string.Format("--in=\"{0}\" --remove-before={1} --import-file=\"{3}\" --import-on-or-after={2} --save", skyFile,
accumulationWindow.StartDate.ToShortDateString(),
accumulationWindow.StartDate.ToShortDateString(), dataFile1);
var importContext = new ImportContext(dataFile1);
Assert.IsFalse(importContext.ImportExisting);
var args = mainSettingsTab.SkylineRunnerArgs(importContext);
Assert.AreEqual(expected, args.Trim());
}
public void TestValidateSettings()
{
var logger = new TestLogger();
var mainControl = new TestAppControl();
var mainSettingsTab = new MainSettingsTab(mainControl, logger);
Assert.IsFalse(mainSettingsTab.ValidateSettings());
var log = logger.GetLog();
Assert.IsTrue(log.Contains("Please specify path to a Skyline file."));
Assert.IsTrue(log.Contains("Please specify path to a folder where mass spec. files will be written."));
Assert.IsTrue(log.Contains("Please specify a value for the \"Accumulation time window\"."));
const string skyPath = "C:\\dummy\\path\\Test.sky";
const string folderPath = "C:\\dummy\\path";
var accumWindow = "not a number";
var settings = new MainSettings()
{
SkylineFilePath = skyPath,
FolderToWatch = folderPath,
ResultsWindowString = "not a number",
// ImportExistingFiles = false
};
mainControl = new TestAppControl();
mainControl.SetUIMainSettings(settings);
mainSettingsTab = new MainSettingsTab(mainControl, logger);
logger.Clear();
Assert.IsFalse(mainSettingsTab.ValidateSettings());
log = logger.GetLog();
Assert.IsTrue(log.Contains(string.Format("Skyline file {0} does not exist.", skyPath)));
Assert.IsTrue(log.Contains(string.Format("Folder {0} does not exist.", folderPath)));
Assert.IsTrue(log.Contains(string.Format("Invalid value for \"Accumulation time window\": {0}.", accumWindow)));
accumWindow = "-1";
settings.ResultsWindowString = accumWindow;
logger.Clear();
mainSettingsTab = new MainSettingsTab(mainControl, logger);
Assert.IsFalse(mainSettingsTab.ValidateSettings());
log = logger.GetLog();
Assert.IsTrue(
log.Contains(string.Format("\"Accumulation time window\" cannot be less than {0} days.",
MainSettings.ACCUM_TIME_WINDOW)));
}
public void TestSkylineRunnerArgsImportExisting()
{
const string skyFile = @"C:\Dummy\path\Test_file.sky";
const string dataFile1 = @"C:\Dummy\path\Test1.raw";
const string dataFile2 = @"C:\Dummy\path\Test2.raw";
var logger = new TestLogger();
var mainSettings = new MainSettings()
{
SkylineFilePath = skyFile,
ResultsWindowString = MainSettings.ACCUM_TIME_WINDOW.ToString()
};
var mainSettingsTab = new MainSettingsTab(null, logger)
{
Settings = mainSettings
};
// Create an import context.
var importContext = new ImportContext(new List<string>() { dataFile1, dataFile2 });
Assert.IsTrue(importContext.ImportExisting);
// Arguments for the first file.
var expected =
string.Format("--in=\"{0}\" --import-file=\"{1}\" --save", skyFile, dataFile1);
importContext.GetNextFile();
var args = mainSettingsTab.SkylineRunnerArgs(importContext);
Assert.AreEqual(expected, args.Trim());
// Arguments for the second file
importContext.GetNextFile();
Assert.IsTrue(importContext.ImportingLast());
expected =
string.Format("--in=\"{0}\" --import-file=\"{1}\" --save", skyFile, dataFile2);
args = mainSettingsTab.SkylineRunnerArgs(importContext);
Assert.AreEqual(expected, args.Trim());
Assert.IsNull(importContext.GetNextFile());
}
