private void dataAnalyze(String path)
{
mGlobalData = load(path);
SetGraph(mGlobalData, mShowingFrameFrom, mShowingFrameTo);
List <StNormalizedIntensity> intensities = null;
mPostResult = Kernel.PostAnalyze(mGlobalData, out intensities,
mNoiseSampleMean,
mShowingFrameFrom, mShowingFrameTo);
SetHistogram(intensities);
}
public static StPostAnalyzeResult PostAnalyze(Decimal[] data,
out List <StNormalizedIntensity> pointIntensities,
Decimal noise, int frameFrom, int frameTo)
{
StPostAnalyzeResult retval = new StPostAnalyzeResult();
pointIntensities = new List <StNormalizedIntensity>();
List <Decimal> accuIntensities = new List <Decimal>();
Decimal curSpanIntensityBuf = 0;
int curSpanFrameCount = 0;
bool OnMove = false;
for (int i = frameFrom; i <= frameTo; i++)
{
if (data[i] > noise && OnMove == false)//status change to On
{
OnMove = true;
retval.MovementCount++;
curSpanFrameCount++;
curSpanIntensityBuf += (data[i] - noise);
}
else if (data[i] < noise && OnMove == true)//status change to Off
{
OnMove = false;
accuIntensities.Add(curSpanIntensityBuf);
StNormalizedIntensity intensity = new StNormalizedIntensity();
intensity.Intensity = curSpanIntensityBuf / curSpanFrameCount;
intensity.Duration = curSpanFrameCount;
pointIntensities.Add(intensity);
curSpanIntensityBuf = 0;
curSpanFrameCount = 0;
}
else if (data[i] > noise && OnMove == true)//still On
{
curSpanFrameCount++;
curSpanIntensityBuf += (data[i] - noise);
}
else //still off
{
//immobility duration
retval.ImmobilityDureation++;
}
}
if (curSpanIntensityBuf - 0 > EPSILON)
{
accuIntensities.Add(curSpanIntensityBuf);
StNormalizedIntensity intenLeft = new StNormalizedIntensity();
intenLeft.Intensity = curSpanIntensityBuf / curSpanFrameCount;
intenLeft.Duration = curSpanFrameCount;
pointIntensities.Add(intenLeft);
}
//frame count
retval.FrameCount = frameTo - frameFrom + 1;//multiple span mani till here
//intentsity mean
for (int i = 0; i < accuIntensities.Count; i++)
{
retval.MovementIntentsityMean += accuIntensities[i];
}
if (accuIntensities.Count != 0)
{
retval.MovementIntentsityMean /= accuIntensities.Count;
}
else
{
retval.MovementIntentsityMean = 0;
}
//intentsity SD
retval.MovementIntensitySD =
getSD(retval.MovementIntentsityMean, accuIntensities.ToArray());
return(retval);
}
