private static void addAdditionalInfo(TargetedResultDTO tr, TopDownTargetedResult result)
{
var r = (TopDownTargetedResultDTO)tr;
r.PrsmList = null;
r.ChargeStateList = null;
r.Quantitation = result.ChromPeakSelected != null ? result.ChromPeakSelected.Height : 0;
r.MatchedMassTagID = ((LcmsFeatureTarget)result.Target).FeatureToMassTagID;
//r.ProteinName = "";
//r.ProteinMass = 0.0;
r.PeptideSequence = result.Target.Code;
r.MostAbundantChargeState = r.ChargeState;
r.ChromPeakSelectedHeight = result.ChromPeakSelected != null ? result.ChromPeakSelected.Height : 0;
}
public TargetedResultBase CreateMassTagResult(TargetBase massTag)
{
TargetedResultBase result;
switch (ResultType)
{
case Globals.ResultType.BASIC_TARGETED_RESULT:
result = new MassTagResult(massTag);
break;
case Globals.ResultType.N14N15_TARGETED_RESULT:
result = new N14N15_TResult(massTag);
break;
case Globals.ResultType.O16O18_TARGETED_RESULT:
result = new O16O18TargetedResultObject(massTag);
break;
case Globals.ResultType.SIPPER_TARGETED_RESULT:
result = new SipperLcmsTargetedResult(massTag);
break;
case Globals.ResultType.TOPDOWN_TARGETED_RESULT:
result = new TopDownTargetedResult(massTag);
break;
case Globals.ResultType.DEUTERATED_TARGETED_RESULT:
result = new DeuteratedTargetedResultObject(massTag);
break;
default:
result = new MassTagResult(massTag);
break;
}
this.MassTagResultList.Add(massTag, result);
result.MSFeatureID = MSFeatureCounter;
result.Score = 1;
result.Run = this.Run;
this.MSFeatureCounter++;
return(result);
}
