public List <NECCombinedDataModel> NEC_DatasetOverTimeSpan(TimespanParameter timespan)
{
List <NECCombinedDataModel> data = new List <NECCombinedDataModel>();
for (DateTime date = timespan.Starttime.Date; date <= timespan.Endtime.Date; date.AddDays(1))
{
data.Add(_necDataFac.Process(date));
}
return(data);
}
public List <NECResultDataModel> NECAlgorithmResult(TimespanParameter timespan)
{
if (timespan.Starttime == timespan.Endtime)
{
return(_necResultDataFac.Process(timespan.Starttime));
}
else
{
return(_necResultDataFac.Process(timespan));
}
}
public List <NECResultDataModel> Process(TimespanParameter timespan)
{
List <NECResultDataModel> concatList = new List <NECResultDataModel>();
for (DateTime date = timespan.Starttime.Date; date <= timespan.Endtime.Date; date.AddDays(1))
{
List <NECResultDataModel> lst = Process(date);
concatList.AddRange(lst);
}
return(concatList);
}
private void AddMissingValues(TimespanParameter parameter)
{
ICollection <string> wards = dataAggregationStorage[parameter.Endtime.Date].Keys;
DateTime date = parameter.Starttime.Date;
while (dataAggregationStorage[date].Keys.Count != wards.Count)
{
foreach (string ward in wards)
{
if (!dataAggregationStorage[date].ContainsKey(ward))
{
dataAggregationStorage[date].Add(ward, InitializeEmptyEpiCurveModel(dataAggregationStorage[parameter.Endtime.Date][ward], date, Purpose.FOR_PAST));
}
}
date = date.AddDays(1);
}
}
public ActionResult <List <EpiCurveModel> > Labor_ErregerProTag_TTEsKSs([FromBody] TimespanParameter parameter)
{
_logger.LogInformation("CALLED Labor_ErregerProTag_TTEsKSs with parameters: \n\r Starttime: {start} \n\r Endtime: {end} \n\r internal PathogenList: 94500-6, 94745-7, 94558-4", parameter.Starttime, parameter.Endtime);
try
{
EpiCurveParameter epiParams = new EpiCurveParameter()
{
Endtime = parameter.Endtime, Starttime = parameter.Starttime, PathogenCodes = new List <string>()
{
"94500-6", "94745-7", "94558-4"
}
};
return(_labData.Labor_Epikurve(epiParams));
}
catch (Exception e)
{
_logger.LogWarning("CALLED Labor_ErregerProTag_TTEsKSs:" + e.Message);
return(ErrorHandling(e));
}
}
public static AQLQuery NECPatientLaborData(string PatientID, TimespanParameter timespan)
{
//TODO: AQL musst zu eine MIBI AQL umgewandelt werden.
return(new AQLQuery("NECPatientLaborData", $"SELECT e/ehr_id/value as PatientID, z/items[at0015]/value/value as ZeitpunktProbenentnahme, z/items[at0029]/value/defining_code/code_string/value as MaterialID, g/items[at0001]/value/value as Befund, g/items[at0024]/value/defining_code/code_string as KeimID, c/context/start_time/value as Befunddatum FROM EHR e CONTAINS COMPOSITION c[openEHR-EHR-COMPOSITION.report-result.v1] CONTAINS (CLUSTER f[openEHR-EHR-CLUSTER.case_identification.v0] and CLUSTER z[openEHR-EHR-CLUSTER.specimen.v1] and CLUSTER j[openEHR-EHR-CLUSTER.laboratory_test_panel.v0] CONTAINS CLUSTER g[openEHR-EHR-CLUSTER.laboratory_test_analyte.v1]) WHERE c/name/value = 'Virologischer Befund' and g/items[at0001]/name = 'Nachweis' and g/items[at0024]/name = 'Virus' and e/ehr_id/value = '{PatientID}' and z/items[at0015]/value/value >= '{timespan.Starttime}' and z/items[at0015]/value/value <= '{timespan.Endtime}'"));
}
public EpiCurveParameter(TimespanParameter timespanParameter, List <string> pathogenCodes)
{
Starttime = timespanParameter.Starttime;
Endtime = timespanParameter.Endtime;
PathogenCodes = pathogenCodes;
}