private void Startbutton_Click(object sender, EventArgs e)
{
//Initialize Stochfit
if (FileNameTB.Text == string.Empty)
{
return;
}
//If we already have a rho loaded, invalidate it
if (Z != null)
{
Z = null;
Rho = null;
reflgraphobject.RemoveGraphfromArray(modelreflname);
rhographobject.RemoveGraphfromArray(rhomodelname);
}
//If RhoLipid was entered as zero, make it a bit larger
if (double.Parse(Rholipid.Text) == 0)
{
Rholipid.Text = "0.1";
}
SetProgressBar(IterationsTB.ToInt() - 1, 0, 0);
int iterations = IterationsTB.ToInt();
if (progressBar1.Value > 0 && progressBar1.Value < iterations)
{
iterations = IterationsTB.ToInt() - progressBar1.Value;
}
reflgraphobject.SubSLD = SubSLDTB.ToDouble();
GetReflSettings(ref InfoStruct);
NativeMethods.Init(InfoStruct);
NativeMethods.Start(iterations);
NativeMethods.GenPriority(Priority.SelectedIndex);
myTimer = new System.Timers.Timer();
myTimer.Elapsed += new ElapsedEventHandler(OnUpdateTimer);
myTimer.Interval = 5000;
myTimer.Start();
DisableInterface(true);
setModelOptionsToolStripMenuItem.Enabled = setResolutionOptionsToolStripMenuItem.Enabled =
miscellaneousOptionsToolStripMenuItem.Enabled = setModelOptionsToolStripMenuItem.DropDown.Enabled = setResolutionOptionsToolStripMenuItem.DropDown.Enabled =
miscellaneousOptionsToolStripMenuItem.DropDown.Enabled = false;
MiscParametersBox.Enabled = OptionsMenuItem.Enabled = reflgraphobject.ProgramRunningState = Rhomodel.Enabled = Cancelbutton.Enabled = true;
previtertime = DateTime.Now;
//WriteSettings to file
WriteSettings();
InfoStruct.Dispose();
}
private void FillSettingsStruct(ref ModelSettings settings)
{
settings.Title = TitleTB.Text;
settings.CritEdgeOffset = int.Parse(critedgeoffTB.Text);
settings.HighQOffset = int.Parse(HQoffsetTB.Text);
settings.SurflayerSLD = Rholipid.ToDouble();
settings.SubSLD = SubSLDTB.ToDouble();
settings.SupSLD = SupSLDTB.ToDouble();
settings.Boxes = Boxlayers.ToInt();
settings.Surflayerlength = layerlength.ToDouble();
settings.SurflayerAbs = SurfAbs.ToDouble();
settings.Wavelength = wavelength.ToDouble();
settings.SubAbs = SubAbs.ToDouble();
settings.SupAbs = SupAbsTB.ToDouble();
settings.UseAbs = UseAbsCB.Checked;
settings.SupOffset = Double.Parse(SupoffsetTB.Text);
settings.Percerror = Double.Parse(QErrTB.Text);
settings.Forcenorm = ForceNormCB.Checked;
settings.Forcesig = Double.Parse(SigTSTB.Text);
if (double.Parse(SigTSTB.Text) == 0)
{
settings.SigmaSearchPerc = int.Parse(SigmaSearchTB.Text);
}
else
{
settings.SigmaSearchPerc = 0;
}
settings.Debug = debugToolStripMenuItem.Checked;
settings.ForceXR = forceXRToolStripMenuItem1.Checked;
settings.Resolution = int.Parse(ResolutionTB.Text);
settings.Totallength = Double.Parse(TotlengthTB.Text);
settings.ImpNorm = ImpNormCB.Checked;
settings.FitFunc = objectiveCB.SelectedIndex;
settings.ParamTemp = Double.Parse(ParamTempTB.Text);
if (UseAbsCB.Checked)
{
settings.AbsorptionSearchPerc = int.Parse(AbsorptionSearchTB.Text);
}
else
{
settings.AbsorptionSearchPerc = 0;
}
if (ImpNormCB.Checked)
{
settings.NormalizationSearchPerc = int.Parse(NormSearchTB.Text);
}
else
{
settings.NormalizationSearchPerc = 0;
}
settings.Algorithm = AlgorithmCB.SelectedIndex;
settings.AnnealInitTemp = m_dAnnealtemp;
settings.AnnealTempPlat = m_iAnnealplat;
settings.AnnealSlope = m_dAnnealslope;
settings.AnnealGamma = m_dSTUNGamma;
settings.STUNfunc = m_iSTUNfunc;
settings.STUNAdaptive = m_bSTUNAdaptive;
settings.STUNtempiter = m_iSTUNtempiter;
settings.STUNdeciter = m_iSTUNdeciter;
settings.STUNgammadec = m_dSTUNgammadec;
}
private void LoadDataFile(string origreflfilename)
{
try
{
if (!ReflData.Instance.SetReflData(origreflfilename, !errorsAreInVarianceToolStripMenuItem.Checked))
{
throw new Exception("Could not load file");
}
FileNameTB.Text = origreflfilename;
settingsfile = origreflfilename + "settings.xml";
reflgraphobject.SetAllFonts("Garamond", 20, 18);
reflgraphobject.SubSLD = SubSLDTB.ToDouble();
reflgraphobject.SupSLD = SupSLDTB.ToDouble();
reflgraphobject.GetHighQOffset = ReflData.Instance.GetNumberDataPoints;
reflgraphobject.GetLowQOffset = 0;
reflgraphobject.SetGraphType(forceRQ4GraphingToolStripMenuItem.Checked, fresnelcb.Checked);
//Load the modeled files if they are available
if (File.Exists(settingsfile) && !m_bloadfromcommandline)
{
if (MessageBox.Show("Do you want to load the previous run?", "Resume?", MessageBoxButtons.YesNo) == DialogResult.Yes)
{
rhographobject.Clear();
reflgraphobject.Clear();
if (!LoadSettings())
{
return;
}
string tempfile = ReflData.Instance.GetWorkingDirectory + "\\rho.dat";
if (File.Exists(tempfile))
{
LoadZ(tempfile);
rhographobject.SubSLD = double.Parse(SubSLDTB.Text);
rhographobject.UseSLD = UseSLDToolStripMenuItem.Checked;
if (UseSLDToolStripMenuItem.Checked)
{
rhographobject.SetAxisTitles("Z", "SLD");
rhographobject.Title = "Model Independent SLD Fit";
}
else
{
rhographobject.SetAxisTitles("Z", "Normalized Electron Density");
rhographobject.Title = "Model Independent Electron Density Fit";
}
rhographobject.LoadFiletoGraph(tempfile.ToString(), rhomodelname, "Model Independent Electron Density Fit", Color.Tomato, SymbolType.None, 0, true);
}
tempfile = ReflData.Instance.GetWorkingDirectory + "\\rf.dat";
if (File.Exists(tempfile))
{
reflgraphobject.SubSLD = double.Parse(SubSLDTB.Text);
reflgraphobject.SupSLD = double.Parse(SupSLDTB.Text);
reflgraphobject.SetGraphType(forceRQ4GraphingToolStripMenuItem.Checked, fresnelcb.Checked);
reflgraphobject.GetLowQOffset = int.Parse(critedgeoffTB.Text);
reflgraphobject.GetHighQOffset = ReflData.Instance.GetNumberDataPoints - int.Parse(HQoffsetTB.Text);
//Load the data file to the graph
reflgraphobject.LoadDatawithErrorstoGraph("Reflectivity Data", Color.Black, SymbolType.Circle, 5, ReflData.Instance.GetQData, ReflData.Instance.GetReflData);
reflgraphobject.LoadFiletoGraph(tempfile.ToString(), modelreflname, "Model Independent Reflectivity", Color.Tomato, SymbolType.Square, 2, true);
}
GraphCollection.Instance.MainReflGraph = reflgraphobject;
GraphCollection.Instance.MainRhoGraph = rhographobject;
UpdateReportParameters();
}
else
{
//Clear the report
ReportGenerator.Instance.ClearAll();
//Load the data file to the graph
reflgraphobject.LoadDatawithErrorstoGraph("Reflectivity Data", Color.Black, SymbolType.Circle, 5, ReflData.Instance.GetQData, ReflData.Instance.GetReflData);
FileInfo info = new FileInfo(settingsfile);
if (File.Exists(info.DirectoryName + "\\pop.dat"))
{
//Create a backup folder if we don't have one
if (!System.IO.Directory.Exists(info.DirectoryName + "\\FitBackUp"))
{
System.IO.Directory.CreateDirectory(info.DirectoryName + "\\FitBackUp");
}
int index = 0;
for (; ;)
{
if (!System.IO.Directory.Exists(info.DirectoryName + "\\FitBackUp\\Fit" + index.ToString()))
{
System.IO.Directory.CreateDirectory(info.DirectoryName + "\\FitBackUp\\Fit" + index.ToString());
break;
}
index++;
}
string fileloc = info.DirectoryName + "\\FitBackUp\\Fit" + index.ToString();
File.Move(info.DirectoryName + "\\pop.dat", fileloc + "\\pop.dat");
File.Move(settingsfile, fileloc + "\\" + info.Name);
if (File.Exists(info.DirectoryName + "\\rf.dat"))
{
File.Move(info.DirectoryName + "\\rf.dat", fileloc + "\\rf.dat");
}
if (File.Exists(info.DirectoryName + "\\rho.dat"))
{
File.Move(info.DirectoryName + "\\rho.dat", fileloc + "\\rho.dat");
}
if (File.Exists(info.DirectoryName + "\\reflfile.dat"))
{
File.Move(info.DirectoryName + "\\reflfile.dat", fileloc + "\\reflfile.dat");
}
if (File.Exists(info.DirectoryName + "\\reflrhofit.dat"))
{
File.Move(info.DirectoryName + "\\reflrhofit.dat", fileloc + "\\reflrhofit.dat");
}
}
}
}
else
{
//Load the data file to the graph
reflgraphobject.LoadDatawithErrorstoGraph("Reflectivity Data", Color.Black, SymbolType.Circle, 5, ReflData.Instance.GetQData, ReflData.Instance.GetReflData);
}
DisableInterface(false);
Cancelbutton.Enabled = false;
reflgraphobject.SetBounds();
SubAbs.Enabled = SupAbsTB.Enabled = SurfAbs.Enabled = UseAbsCB.Checked;
}
catch (Exception ex)
{
origreflfilename = string.Empty;
FileNameTB.Clear();
DisableInterface(true);
MessageBox.Show(ex.Message);
}
}
