List <string> GetTumorLineCombos(SentenceFragment sf, Dictionary <string, List <string> > tumorLines)
{
var tumorLineCombos = new List <string>();
string lineName = sf.RecognizedEntities.
Where(re => String.Compare(re.Entity.DomainName, CAConstants.DIMENSION1_COMPONENT2, true) == 0).
FirstOrDefault()?.
Value.
ToString();
string tumorName = sf.RecognizedEntities.
Where(re => String.Compare(re.Entity.DomainName, CAConstants.DIMENSION1_COMPONENT1, true) == 0).
FirstOrDefault()?.
Value.
ToString();
if (!String.IsNullOrWhiteSpace(lineName))
{
tumorLineCombos.Add(tumorName + " " + lineName);
}
else if (!String.IsNullOrWhiteSpace(tumorName) && tumorLines.ContainsKey(tumorName))
{
foreach (var line in tumorLines[tumorName])
{
if (String.IsNullOrWhiteSpace(line))
{
tumorLineCombos.Add(tumorName);
}
else
{
tumorLineCombos.Add(tumorName + " " + line);
}
}
}
return(tumorLineCombos);
}
private List <SentenceFragment> GetDataSlicesFromDataTable(DataTable dt)
{
var slices = new List <SentenceFragment>();
foreach (DataRow row in dt.Rows)
{
SentenceFragment sf = new SentenceFragment();
var ners = new List <RecognizedEntity>();
if (dt.Columns.Contains(CAConstants.DIMENSION1_COMPONENT1))
{
ners.Add(new RecognizedEntity {
Entity = new Tumor(), Value = row[CAConstants.DIMENSION1_COMPONENT1].SafeTrim()
});
}
if (dt.Columns.Contains(CAConstants.DIMENSION1_COMPONENT2))
{
ners.Add(new RecognizedEntity {
Entity = new TumorLine(), Value = row[CAConstants.DIMENSION1_COMPONENT2].SafeTrim()
});
}
if (dt.Columns.Contains(CAConstants.DIMENSION1_COMPONENT3))
{
ners.Add(new RecognizedEntity {
Entity = new TumorSegment(CAConstants.DEFAULT_SEGMENT), Value = row[CAConstants.DIMENSION1_COMPONENT3].SafeTrim()
});
}
if (dt.Columns.Contains(CAConstants.DIMENSION1_COMPONENT4))
{
ners.Add(new RecognizedEntity {
Entity = new TumorSubsegment(CAConstants.DEFAULT_SUBSEGMENT), Value = row[CAConstants.DIMENSION1_COMPONENT4].SafeTrim()
});
}
if (dt.Columns.Contains(CAConstants.DIMENSION1_COMPONENT5))
{
ners.Add(new RecognizedEntity {
Entity = new TumorTestStatus(), Value = row[CAConstants.DIMENSION1_COMPONENT5].SafeTrim()
});
}
if (dt.Columns.Contains(CAConstants.DIMENSION2))
{
ners.Add(new RecognizedEntity {
Entity = new Regimen(), Value = row[CAConstants.DIMENSION2].SafeTrim()
});
}
if (dt.Columns.Contains(CAConstants.DIMENSION4))
{
ners.Add(new RecognizedEntity {
Entity = new Time(), Value = row[CAConstants.DIMENSION4].SafeTrim()
});
}
var measureRE = recognitionOutput.SentenceFragments[NERClause.EQUAL][0].RecognizedEntities.
Where(re => re.IsMeasure).
FirstOrDefault().
Clone() as RecognizedEntity;
var measureField = measureRE.Entity.FieldName;
double measureVal = Math.Round(row[measureField].SafeToDouble() * 100, CAConstants.CHART_LABEL_PRECISION);
measureRE.Value = measureVal;
measureRE.RecognizedValue = measureVal;
ners.Add(measureRE);
if (ners.AnyOrNotNull())
{
sf.AddOrReplaceNERs(ners);
}
slices.Add(sf);
}
return(slices);
}
