/// <summary>
        /// Data input yang dimasukkan dari array 0 - akhir itu nilai reflectance dari wave length: 2501.982414 sampe 1350.724346
        /// </summary>
        /// <param name="DataReflectance"></param>
        /// <returns></returns>
        ModelInput PreProcessData(List <float> DataReflectance)
        {
            try
            {
                var item = new ModelInput();
                //convert to absorbance

                for (int col = 0; col < DataReflectance.Count; col++)
                {
                    DataReflectance[col] = (float)Math.Log(1 / DataReflectance[col]);
                }


                //sav gol filter
                SavitzkyGolayFilter filter = new SavitzkyGolayFilter(11, 2);

                List <double> rowDatas = new List <double>();
                for (int col = 0; col < DataReflectance.Count; col++)
                {
                    rowDatas.Add(DataReflectance[col]);
                }
                var filteredRow = filter.Process(rowDatas.ToArray());
                for (int col = 0; col < DataReflectance.Count; col++)
                {
                    DataReflectance[col] = (float)filteredRow[col];
                }


                //SNV

                rowDatas = new List <double>();
                for (int col = 0; col < DataReflectance.Count; col++)
                {
                    rowDatas.Add(DataReflectance[col]);
                }
                var mean   = rowDatas.Average();
                var stdDev = MathExt.StdDev(rowDatas);
                for (int col = 0; col < DataReflectance.Count; col++)
                {
                    DataReflectance[col] = (float)((DataReflectance[col] - mean) / stdDev);
                }

                item.FeatureVector = DataReflectance.ToArray();

                return(item);
            }
            catch
            {
                return(null);
            }
        }
Beispiel #2
0
        static void Main(string[] args)
        {
            FileInfo file  = new FileInfo(@"C:\Users\micly\Downloads\Course_pied_en_soir_e.gpx");
            var      coord = GpxReader.ReadFile(file);

            //SavitzkyGolayFilter filter = new SavitzkyGolayFilter(50, 5);

            SavitzkyGolayFilter filter = new SavitzkyGolayFilter(30, 5);
            var lats  = filter.Process(coord.Select(c => c.Item1).ToArray());
            var longs = filter.Process(coord.Select(c => c.Item2).ToArray());

            coord = lats.ToList().Zip(longs, (x, y) => new Tuple <double, double>(x, y)).ToList();
            GpxReader.WriteFile(file, coord);

            Console.WriteLine("Hello World!");
        }
        void PreProcessed(string TargetFolder, string PreProcessFolder)
        {
            if (!Directory.Exists(PreProcessFolder))
            {
                Directory.CreateDirectory(PreProcessFolder);
            }
            var fileCsvs = Directory.GetFiles(TargetFolder, "*.csv");

            foreach (var file in fileCsvs)
            {
                var dt = ConvertCSVtoDataTable(file);
                //convert to absorbance
                foreach (DataRow dr in dt.Rows)
                {
                    for (int col = 1; col < dt.Columns.Count; col++)
                    {
                        dr[col] = Math.Log(1 / double.Parse(dr[col].ToString()));
                    }
                }
                dt.AcceptChanges();
                //sav gol filter
                SavitzkyGolayFilter filter = new SavitzkyGolayFilter(11, 2);
                foreach (DataRow dr in dt.Rows)
                {
                    List <double> rowDatas = new List <double>();
                    for (int col = 1; col < dt.Columns.Count; col++)
                    {
                        rowDatas.Add(double.Parse(dr[col].ToString()));
                    }
                    var filteredRow = filter.Process(rowDatas.ToArray());
                    for (int col = 1; col < dt.Columns.Count; col++)
                    {
                        dr[col] = filteredRow[col - 1];
                    }
                }
                dt.AcceptChanges();
                //SNV
                foreach (DataRow dr in dt.Rows)
                {
                    List <double> rowDatas = new List <double>();
                    for (int col = 1; col < dt.Columns.Count; col++)
                    {
                        rowDatas.Add(double.Parse(dr[col].ToString()));
                    }
                    var mean   = rowDatas.Average();
                    var stdDev = MathExt.StdDev(rowDatas);
                    for (int col = 1; col < dt.Columns.Count; col++)
                    {
                        dr[col] = (double.Parse(dr[col].ToString()) - mean) / stdDev;
                    }
                }
                dt.AcceptChanges();
                //save to file
                {
                    var           col = 0;
                    StringBuilder sb  = new StringBuilder();
                    //print column name

                    sb.Append(dt.Columns[col].ColumnName);
                    for (int x = 1; x < dt.Columns.Count; x++)
                    {
                        sb.Append("," + dt.Columns[x].ColumnName);
                    }
                    sb.Append(Environment.NewLine);
                    //print data column
                    foreach (DataRow dr in dt.Rows)
                    {
                        sb.Append(dr[col].ToString());
                        for (int x = 1; x < dt.Columns.Count; x++)
                        {
                            sb.Append("," + dr[x].ToString());
                        }
                        sb.Append(Environment.NewLine);
                    }
                    var PathStr = PreProcessFolder + "\\" + dt.Columns[col].ColumnName + ".csv";
                    File.WriteAllText(PathStr, sb.ToString());
                    ConsoleHelper.Print($"{dt.Columns[col].ColumnName} - file generated.");
                }
            }
        }
Beispiel #4
0
        //---------------------------------宜運函數(首)---------------------

        private void displayRoiSensorView(Bitmap input_image)//育代
        {
            //this.chart2.Series.Clear();

            int W = input_image.Width, H = input_image.Height;
            //Bitmap image_roi_for_gray = new Bitmap(w, h);

            // Bitmap im1 = new Bitmap(w, h);//讀出原圖X軸 pixel
            Bitmap im1     = new Bitmap(W, H); //讀出原圖X軸 pixel
            int    Pixel_x = 0;                //正在被掃描的點
            int    Pixel_y = 0;

            double[] ARed           = new double[W];
            double[] AGreen         = new double[W];
            double[] ABlue          = new double[W];
            double[] AGray          = new double[W];
            double[] IntensityRed   = new double[W];
            double[] IntensityGreen = new double[W];
            double[] IntensityBlue  = new double[W];
            double[] IntensityGray  = new double[W];

            var sgf = new SavitzkyGolayFilter(left_length, right_length, Polynomial);

            System.Windows.Forms.DataVisualization.Charting.Series seriesRed   = new System.Windows.Forms.DataVisualization.Charting.Series("紅色", 1000);
            System.Windows.Forms.DataVisualization.Charting.Series seriesGreen = new System.Windows.Forms.DataVisualization.Charting.Series("綠色", 1000);
            System.Windows.Forms.DataVisualization.Charting.Series seriesBlue  = new System.Windows.Forms.DataVisualization.Charting.Series("藍色", 1000);
            System.Windows.Forms.DataVisualization.Charting.Series seriesGray  = new System.Windows.Forms.DataVisualization.Charting.Series("灰階", 1000);
            System.Windows.Forms.DataVisualization.Charting.Series seriesClb   = new System.Windows.Forms.DataVisualization.Charting.Series("波長校正", 1000);
            System.Windows.Forms.DataVisualization.Charting.Series seriesSG1   = new System.Windows.Forms.DataVisualization.Charting.Series("SG", 1000);
            //Console.WriteLine("W:"+W);

            /*
             * for (k = 0; k < W; k++)
             * {
             *     //theWL = parameter_buffer[4] * (Math.Pow(k, 4)) + parameter_buffer[3] * (Math.Pow(k, 3)) + parameter_buffer[2] * (Math.Pow(k, 2)) + parameter_buffer[1] * k + parameter_buffer[0];
             *     //seriesClb.Points.AddXY(Convert.ToDouble(k), theWL);
             * }*/

            for (Pixel_x = 0; Pixel_x < W; Pixel_x++)
            {
                for (Pixel_y = 0; Pixel_y < H; Pixel_y++)
                {
                    //int xx = Pixel_x + 1;
                    //int yy = Pixel_y + 1;

                    //先把圖變灰階
                    Color p0 = input_image.GetPixel(Pixel_x, Pixel_y);//太快會閃退,全世界都在用image_roi
                    int   R = p0.R, G = p0.G, B = p0.B;
                    int   gray = (R * 313524 + G * 615514 + B * 119538) >> 20;
                    Color p1   = Color.FromArgb(gray, gray, gray);
                    //im1.SetPixel(i, j, p1);
                    ARed[Pixel_x]   = ARed[Pixel_x] + R;
                    AGreen[Pixel_x] = AGreen[Pixel_x] + G;
                    ABlue[Pixel_x]  = ABlue[Pixel_x] + B;
                    AGray[Pixel_x]  = AGray[Pixel_x] + gray;
                }
                IntensityRed[Pixel_x]   = ARed[Pixel_x] / H;   //平均
                IntensityGreen[Pixel_x] = AGreen[Pixel_x] / H; //平均
                IntensityBlue[Pixel_x]  = ABlue[Pixel_x] / H;  //平均
                IntensityGray[Pixel_x]  = AGray[Pixel_x] / H;  //平均
            }
            var sg           = new DoubleVector(IntensityGray);
            var IntensitySG1 = sgf.Filter(sg);
            var IntensitySG  = IntensitySG1.ToArray();

            for (Pixel_x = 0; Pixel_x < W; Pixel_x++)
            {
                double WL_x     = 0;
                double WL_x_max = 0;
                // int k = 0;

                WL_x_max = parameter_buffer[4] * (Math.Pow(W - 1, 4)) + parameter_buffer[3] * (Math.Pow(W - 1, 3)) + parameter_buffer[2] * (Math.Pow(W - 1, 2)) + parameter_buffer[1] * W - 1 + parameter_buffer[0];
                //this.chart3.BackColor = Color.Black;
                //this.chart1.ChartAreas[0].AxisX.Interval = 5;
                this.chart3.ChartAreas[0].AxisY.Minimum = 0;
                //this.chart3.ChartAreas[0].AxisX.Minimum = 0;
                // this.chart3.ChartAreas[0].AxisX.Maximum = Math.Ceiling(WL_x_max); //<一定要改<--

                //製作seriesClb
                seriesClb.ChartType = System.Windows.Forms.DataVisualization.Charting.SeriesChartType.Line;
                seriesClb.Color     = Color.Brown;

                WL_x = Math.Round(parameter_buffer[4] * (Math.Pow(Pixel_x, 4)) + parameter_buffer[3] * (Math.Pow(Pixel_x, 3)) + parameter_buffer[2] * (Math.Pow(Pixel_x, 2)) + parameter_buffer[1] * Pixel_x + parameter_buffer[0], 2);

                //設定座標大小
                this.chart2.ChartAreas[0].AxisY.Minimum = 0;
                this.chart2.ChartAreas[0].AxisX.Minimum = 0;
                this.chart2.ChartAreas[0].AxisX.Maximum = W;

                //設定標題

                this.chart2.Titles.Clear();
                this.chart2.Titles.Add("S01");
                this.chart2.Titles[0].Text      = "Sensor View Point (Y軸灰度平均)";
                this.chart2.Titles[0].ForeColor = Color.Black;
                this.chart2.Titles[0].Font      = new System.Drawing.Font("標楷體", 16F);

                //給入數據畫圖
                seriesRed.Color   = Color.Red;
                seriesGreen.Color = Color.Green;
                seriesBlue.Color  = Color.Blue;
                seriesGray.Color  = Color.Gray;
                seriesSG1.Color   = Color.Orange;

                seriesRed.Points.AddXY(Pixel_x, IntensityRed[Pixel_x]);
                seriesGreen.Points.AddXY(Pixel_x, IntensityGreen[Pixel_x]);
                seriesBlue.Points.AddXY(Pixel_x, IntensityBlue[Pixel_x]);
                seriesGray.Points.AddXY(Pixel_x, IntensityGray[Pixel_x]);
                seriesClb.Points.AddXY(WL_x, IntensitySG[Pixel_x]);
                seriesSG1.Points.AddXY(Pixel_x, IntensitySG[Pixel_x]);

                seriesRed.ChartType   = System.Windows.Forms.DataVisualization.Charting.SeriesChartType.Line;
                seriesGreen.ChartType = System.Windows.Forms.DataVisualization.Charting.SeriesChartType.Line;
                seriesBlue.ChartType  = System.Windows.Forms.DataVisualization.Charting.SeriesChartType.Line;
                seriesGray.ChartType  = System.Windows.Forms.DataVisualization.Charting.SeriesChartType.Line;
                seriesSG1.ChartType   = System.Windows.Forms.DataVisualization.Charting.SeriesChartType.Line;

                this.chart2.Series.Clear();
                this.chart3.Series.Clear();
                this.chart3.Series.Add(seriesClb);

                if (checkBox1.Checked)
                {
                    this.chart2.Series.Add(seriesRed);
                }
                if (checkBox2.Checked)
                {
                    this.chart2.Series.Add(seriesGreen);
                }
                if (checkBox3.Checked)
                {
                    this.chart2.Series.Add(seriesBlue);
                }
                if (checkBox4.Checked)
                {
                    this.chart2.Series.Add(seriesGray);
                }
                if (checkBox5.Checked)
                {
                    this.chart2.Series.Add(seriesSG1);
                }
            }
            // im1.Save("gray.png");
            //pictureBox2.Refresh();
            //pictureBox2.Image = im1;
        }