Beispiel #1
0
        public void ReaderAndWriterTests()
        {
            var saDataSources = new ISaDataSource[4];

            saDataSources[0] = new SaDataSource("data1", "data1", "A", false, true, "acd", new[] { "\"id\":\"123\"" });
            saDataSources[1] = new SaDataSource("data2", "data2", "T", false, true, "acd", new[] { "\"id\":\"123\"" });
            saDataSources[2] = new SaDataSource("data3", "data3", "A", false, false, "acd", new[] { "\"id\":\"123\"" });
            saDataSources[3] = new SaDataSource("data4", "data4", "T", false, false, "acd", new[] { "\"id\":\"123\"" });

            var saPos = new SaPosition(saDataSources, "A");

            var ms     = new MemoryStream();
            var writer = new ExtendedBinaryWriter(ms);

            saPos.Write(writer);
            ms.Position = 0;

            var reader     = new ExtendedBinaryReader(ms);
            var observedSa = SaPosition.Read(reader);

            Assert.Equal(saPos.GlobalMajorAllele, observedSa.GlobalMajorAllele);
            Assert.Equal(saPos.DataSources.Length, observedSa.DataSources.Length);

            Assert.Equal(saPos.DataSources[3].KeyName, observedSa.DataSources[3].KeyName);

            Assert.Equal(saPos.DataSources[2].JsonStrings, observedSa.DataSources[2].JsonStrings);
            ms.Dispose();
        }
 public void WriteAnnotation(ExtendedBinaryWriter writer)
 {
     SaPosition.Write(writer);
 }