//Constructors
/// <summary>
/// Creates an initialized instance
/// </summary>
/// <param name="timeScale">Membrane time scale (ms)</param>
/// <param name="resistance">Membrane resistance (Mohm)</param>
/// <param name="restV">Membrane rest potential (mV)</param>
/// <param name="resetV">Membrane reset potential (mV)</param>
/// <param name="rheobaseV">Membrane rheobase threshold (mV)</param>
/// <param name="firingThresholdV">Membrane firing threshold (mV)</param>
/// <param name="sharpnessDeltaT">Sharpness of membrane potential change (mV)</param>
/// <param name="adaptationVoltageCoupling">Adaptation voltage coupling (nS)</param>
/// <param name="adaptationTimeConstant">Adaptation time constant (ms)</param>
/// <param name="adaptationSpikeTriggeredIncrement">Spike triggered adaptation increment (pA)</param>
/// <param name="solverMethod">ODE numerical solver method</param>
/// <param name="solverCompSteps">ODE numerical solver computation steps of the time step</param>
public AdExpIFSettings(RandomValueSettings timeScale = null,
RandomValueSettings resistance = null,
RandomValueSettings restV = null,
RandomValueSettings resetV = null,
RandomValueSettings rheobaseV = null,
RandomValueSettings firingThresholdV = null,
RandomValueSettings sharpnessDeltaT = null,
RandomValueSettings adaptationVoltageCoupling = null,
RandomValueSettings adaptationTimeConstant = null,
RandomValueSettings adaptationSpikeTriggeredIncrement = null,
ODENumSolver.Method solverMethod = ODENumSolver.Method.Euler,
int solverCompSteps = 2
)
{
TimeScale = RandomValueSettings.CloneOrDefault(timeScale, TypicalTimeScale);
Resistance = RandomValueSettings.CloneOrDefault(resistance, TypicalResistance);
RestV = RandomValueSettings.CloneOrDefault(restV, TypicalRestV);
ResetV = RandomValueSettings.CloneOrDefault(resetV, TypicalResetV);
RheobaseV = RandomValueSettings.CloneOrDefault(rheobaseV, TypicalRheobaseV);
FiringThresholdV = RandomValueSettings.CloneOrDefault(firingThresholdV, TypicalFiringThresholdV);
SharpnessDeltaT = RandomValueSettings.CloneOrDefault(sharpnessDeltaT, TypicalSharpnessDeltaT);
AdaptationVoltageCoupling = RandomValueSettings.CloneOrDefault(adaptationVoltageCoupling, TypicalAdaptationVoltageCoupling);
AdaptationTimeConstant = RandomValueSettings.CloneOrDefault(adaptationTimeConstant, TypicalAdaptationTimeConstant);
AdaptationSpikeTriggeredIncrement = RandomValueSettings.CloneOrDefault(adaptationSpikeTriggeredIncrement, TypicalAdaptationSpikeTriggeredIncrement);
SolverMethod = solverMethod;
SolverCompSteps = solverCompSteps;
return;
}
//Constructors
/// <summary>
/// Creates an initialized instance
/// </summary>
/// <param name="recoveryTimeScale">Time scale of the recovery variable</param>
/// <param name="recoverySensitivity">Sensitivity of the recovery variable to the subthreshold fluctuations of the membrane potential</param>
/// <param name="recoveryReset">After-spike reset of the recovery variable</param>
/// <param name="restV">Membrane rest potential (mV)</param>
/// <param name="resetV">Membrane reset potential (mV)</param>
/// <param name="firingThresholdV">Membrane firing threshold (mV)</param>
/// <param name="refractoryPeriods">Number of after spike computation cycles while an input stimuli is ignored (ms)</param>
/// <param name="solverMethod">ODE numerical solver method</param>
/// <param name="solverCompSteps">ODE numerical solver computation steps of the time step</param>
/// <param name="stimuliDuration">Duration of the stimulation</param>
public IzhikevichIFSettings(URandomValueSettings recoveryTimeScale = null,
URandomValueSettings recoverySensitivity = null,
URandomValueSettings recoveryReset = null,
RandomValueSettings restV = null,
RandomValueSettings resetV = null,
RandomValueSettings firingThresholdV = null,
int refractoryPeriods = ActivationFactory.DefaultRefractoryPeriods,
ODENumSolver.Method solverMethod = ActivationFactory.DefaultSolverMethod,
int solverCompSteps = ActivationFactory.DefaultSolverCompSteps,
double stimuliDuration = ActivationFactory.DefaultStimuliDuration
)
{
RecoveryTimeScale = URandomValueSettings.CloneOrDefault(recoveryTimeScale, TypicalRecoveryTimeScale);
RecoverySensitivity = URandomValueSettings.CloneOrDefault(recoverySensitivity, TypicalRecoverySensitivity);
RecoveryReset = URandomValueSettings.CloneOrDefault(recoveryReset, TypicalRecoveryReset);
RestV = RandomValueSettings.CloneOrDefault(restV, TypicalRestV);
ResetV = RandomValueSettings.CloneOrDefault(resetV, TypicalResetV);
FiringThresholdV = RandomValueSettings.CloneOrDefault(firingThresholdV, TypicalFiringThresholdV);
RefractoryPeriods = refractoryPeriods;
SolverMethod = solverMethod;
SolverCompSteps = solverCompSteps;
StimuliDuration = stimuliDuration;
Check();
return;
}
//Constructors
/// <summary>
/// Creates an initialized instance
/// </summary>
/// <param name="timeScale">Membrane time scale (ms)</param>
/// <param name="resistance">Membrane resistance (Mohm)</param>
/// <param name="restV">Membrane rest potential (mV)</param>
/// <param name="resetV">Membrane reset potential (mV)</param>
/// <param name="rheobaseV">Membrane rheobase threshold (mV)</param>
/// <param name="firingThresholdV">Membrane firing threshold (mV)</param>
/// <param name="sharpnessDeltaT">Sharpness of membrane potential change (mV)</param>
/// <param name="adaptationVoltageCoupling">Adaptation voltage coupling (nS)</param>
/// <param name="adaptationTimeConstant">Adaptation time constant (ms)</param>
/// <param name="adaptationSpikeTriggeredIncrement">Spike triggered adaptation increment (pA)</param>
/// <param name="solverMethod">ODE numerical solver method</param>
/// <param name="solverCompSteps">ODE numerical solver computation steps of the time step</param>
/// <param name="stimuliDuration">Duration of the stimulation</param>
public AdExpIFSettings(URandomValueSettings timeScale = null,
URandomValueSettings resistance = null,
RandomValueSettings restV = null,
RandomValueSettings resetV = null,
RandomValueSettings rheobaseV = null,
RandomValueSettings firingThresholdV = null,
URandomValueSettings sharpnessDeltaT = null,
URandomValueSettings adaptationVoltageCoupling = null,
URandomValueSettings adaptationTimeConstant = null,
URandomValueSettings adaptationSpikeTriggeredIncrement = null,
ODENumSolver.Method solverMethod = ActivationFactory.DefaultSolverMethod,
int solverCompSteps = ActivationFactory.DefaultSolverCompSteps,
double stimuliDuration = ActivationFactory.DefaultStimuliDuration
)
{
TimeScale = URandomValueSettings.CloneOrDefault(timeScale, TypicalTimeScale);
Resistance = URandomValueSettings.CloneOrDefault(resistance, TypicalResistance);
RestV = RandomValueSettings.CloneOrDefault(restV, TypicalRestV);
ResetV = RandomValueSettings.CloneOrDefault(resetV, TypicalResetV);
RheobaseV = RandomValueSettings.CloneOrDefault(rheobaseV, TypicalRheobaseV);
FiringThresholdV = RandomValueSettings.CloneOrDefault(firingThresholdV, TypicalFiringThresholdV);
SharpnessDeltaT = URandomValueSettings.CloneOrDefault(sharpnessDeltaT, TypicalSharpnessDeltaT);
AdaptationVoltageCoupling = URandomValueSettings.CloneOrDefault(adaptationVoltageCoupling, TypicalAdaptationVoltageCoupling);
AdaptationTimeConstant = URandomValueSettings.CloneOrDefault(adaptationTimeConstant, TypicalAdaptationTimeConstant);
AdaptationSpikeTriggeredIncrement = URandomValueSettings.CloneOrDefault(adaptationSpikeTriggeredIncrement, TypicalAdaptationSpikeTriggeredIncrement);
SolverMethod = solverMethod;
SolverCompSteps = solverCompSteps;
StimuliDuration = stimuliDuration;
Check();
return;
}
//Constructors
/// <summary>
/// Creates an initialized instance
/// </summary>
/// <param name="timeScale">Membrane time scale (ms)</param>
/// <param name="resistance">Membrane resistance (Mohm)</param>
/// <param name="restV">Membrane rest potential (mV)</param>
/// <param name="resetV">Membrane reset potential (mV)</param>
/// <param name="rheobaseV">Membrane rheobase threshold (mV)</param>
/// <param name="firingThresholdV">Membrane firing threshold (mV)</param>
/// <param name="sharpnessDeltaT">Sharpness of membrane potential change (mV)</param>
/// <param name="refractoryPeriods">Number of after spike computation cycles while an input stimuli is ignored (ms)</param>
/// <param name="solverMethod">ODE numerical solver method</param>
/// <param name="solverCompSteps">ODE numerical solver computation steps of the time step</param>
/// <param name="stimuliDuration">Duration of the stimulation</param>
public ExpIFSettings(URandomValueSettings timeScale = null,
URandomValueSettings resistance = null,
RandomValueSettings restV = null,
RandomValueSettings resetV = null,
RandomValueSettings rheobaseV = null,
RandomValueSettings firingThresholdV = null,
URandomValueSettings sharpnessDeltaT = null,
int refractoryPeriods = ActivationFactory.DefaultRefractoryPeriods,
ODENumSolver.Method solverMethod = ActivationFactory.DefaultSolverMethod,
int solverCompSteps = ActivationFactory.DefaultSolverCompSteps,
double stimuliDuration = ActivationFactory.DefaultStimuliDuration
)
{
TimeScale = URandomValueSettings.CloneOrDefault(timeScale, TypicalTimeScale);
Resistance = URandomValueSettings.CloneOrDefault(resistance, TypicalResistance);
RestV = RandomValueSettings.CloneOrDefault(restV, TypicalRestV);
ResetV = RandomValueSettings.CloneOrDefault(resetV, TypicalResetV);
RheobaseV = RandomValueSettings.CloneOrDefault(rheobaseV, TypicalRheobaseV);
FiringThresholdV = RandomValueSettings.CloneOrDefault(firingThresholdV, TypicalFiringThresholdV);
SharpnessDeltaT = URandomValueSettings.CloneOrDefault(sharpnessDeltaT, TypicalSharpnessDeltaT);
RefractoryPeriods = refractoryPeriods;
SolverMethod = solverMethod;
SolverCompSteps = solverCompSteps;
StimuliDuration = stimuliDuration;
Check();
return;
}
//Constructors
/// <summary>
/// Creates an initialized instance
/// </summary>
/// <param name="resistance">Membrane resistance (Mohm)</param>
/// <param name="decayRate">Membrane potential decay rate</param>
/// <param name="resetV">Membrane reset potential (mV)</param>
/// <param name="firingThresholdV">Membrane firing threshold (mV)</param>
/// <param name="refractoryPeriods">Number of after spike computation cycles while an input stimuli is ignored (ms)</param>
public SimpleIFSettings(RandomValueSettings resistance = null,
RandomValueSettings decayRate = null,
RandomValueSettings resetV = null,
RandomValueSettings firingThresholdV = null,
int refractoryPeriods = 1
)
{
Resistance = RandomValueSettings.CloneOrDefault(resistance, TypicalResistance);
DecayRate = RandomValueSettings.CloneOrDefault(decayRate, TypicalDecayRate);
ResetV = RandomValueSettings.CloneOrDefault(resetV, TypicalResetV);
FiringThresholdV = RandomValueSettings.CloneOrDefault(firingThresholdV, TypicalFiringThresholdV);
RefractoryPeriods = refractoryPeriods;
return;
}
//Constructors
/// <summary>
/// Creates an initialized instance
/// </summary>
/// <param name="timeScale">Membrane time scale (ms)</param>
/// <param name="resistance">Membrane resistance (Mohm)</param>
/// <param name="restV">Membrane rest potential (mV)</param>
/// <param name="resetV">Membrane reset potential (mV)</param>
/// <param name="firingThresholdV">Membrane firing threshold (mV)</param>
/// <param name="refractoryPeriods">Number of after spike computation cycles while an input stimuli is ignored (ms)</param>
/// <param name="solverMethod">ODE numerical solver method</param>
/// <param name="solverCompSteps">ODE numerical solver computation steps of the time step</param>
public LeakyIFSettings(RandomValueSettings timeScale = null,
RandomValueSettings resistance = null,
RandomValueSettings restV = null,
RandomValueSettings resetV = null,
RandomValueSettings firingThresholdV = null,
int refractoryPeriods = 1,
ODENumSolver.Method solverMethod = ODENumSolver.Method.Euler,
int solverCompSteps = 2
)
{
TimeScale = RandomValueSettings.CloneOrDefault(timeScale, TypicalTimeScale);
Resistance = RandomValueSettings.CloneOrDefault(resistance, TypicalResistance);
RestV = RandomValueSettings.CloneOrDefault(restV, TypicalRestV);
ResetV = RandomValueSettings.CloneOrDefault(resetV, TypicalResetV);
FiringThresholdV = RandomValueSettings.CloneOrDefault(firingThresholdV, TypicalFiringThresholdV);
RefractoryPeriods = refractoryPeriods;
SolverMethod = solverMethod;
SolverCompSteps = solverCompSteps;
return;
}
//Constructors
/// <summary>
/// Creates an initialized instance
/// </summary>
/// <param name="recoveryTimeScale">Time scale of the recovery variable</param>
/// <param name="recoverySensitivity">Sensitivity of the recovery variable to the subthreshold fluctuations of the membrane potential</param>
/// <param name="recoveryReset">After-spike reset of the recovery variable</param>
/// <param name="restV">Membrane rest potential (mV)</param>
/// <param name="resetV">Membrane reset potential (mV)</param>
/// <param name="firingThresholdV">Membrane firing threshold (mV)</param>
/// <param name="refractoryPeriods">Number of after spike computation cycles while an input stimuli is ignored (ms)</param>
/// <param name="solverMethod">ODE numerical solver method</param>
/// <param name="solverCompSteps">ODE numerical solver computation steps of the time step</param>
public IzhikevichIFSettings(RandomValueSettings recoveryTimeScale = null,
RandomValueSettings recoverySensitivity = null,
RandomValueSettings recoveryReset = null,
RandomValueSettings restV = null,
RandomValueSettings resetV = null,
RandomValueSettings firingThresholdV = null,
int refractoryPeriods = 1,
ODENumSolver.Method solverMethod = ODENumSolver.Method.Euler,
int solverCompSteps = 2
)
{
RecoveryTimeScale = RandomValueSettings.CloneOrDefault(recoveryTimeScale, TypicalRecoveryTimeScale);
RecoverySensitivity = RandomValueSettings.CloneOrDefault(recoverySensitivity, TypicalRecoverySensitivity);
RecoveryReset = RandomValueSettings.CloneOrDefault(recoveryReset, TypicalRecoveryReset);
RestV = RandomValueSettings.CloneOrDefault(restV, TypicalRestV);
ResetV = RandomValueSettings.CloneOrDefault(resetV, TypicalResetV);
FiringThresholdV = RandomValueSettings.CloneOrDefault(firingThresholdV, TypicalFiringThresholdV);
RefractoryPeriods = refractoryPeriods;
SolverMethod = solverMethod;
SolverCompSteps = solverCompSteps;
return;
}
//Constructors
/// <summary>
/// Creates an initialized instance
/// </summary>
/// <param name="negSlope">The negative slope</param>
public LeakyReLUSettings(RandomValueSettings negSlope = null)
{
NegSlope = RandomValueSettings.CloneOrDefault(negSlope, TypicalNegSlope);
return;
}
//Constructors
/// <summary>
/// Creates an initialized instance
/// </summary>
/// <param name="alpha">The Alpha</param>
public ISRUSettings(RandomValueSettings alpha = null)
{
Alpha = RandomValueSettings.CloneOrDefault(alpha, TypicalAlpha);
return;
}
//Constructors
/// <summary>
/// Creates an initialized instance
/// </summary>
/// <param name="alpha">The Alpha</param>
public SoftExponentialSettings(RandomValueSettings alpha = null)
{
Alpha = RandomValueSettings.CloneOrDefault(alpha, TypicalAlpha);
return;
}
//Constructors
/// <summary>
/// Creates an initialized instance
/// </summary>
/// <param name="slope">Slope of the curve</param>
public ElliotSettings(RandomValueSettings slope = null)
{
Slope = RandomValueSettings.CloneOrDefault(slope, TypicalSlope);
return;
}
