public void TagParseTest()
{
var text = System.IO.File.ReadAllText("testResponse.json");
var response = PubTatorResponse.ParseString(text);
Assert.IsTrue(response.Tags.Any(tag => tag.data == "8622" && tag.tag == Tag.Gene));
}
public void AuthorsParseTest()
{
var text = System.IO.File.ReadAllText("testResponse.json");
var response = PubTatorResponse.ParseString(text);
Assert.IsTrue(response.Authors.Any(s => s.Contains("Halfter")));
}
public void PassageParseTest()
{
var text = System.IO.File.ReadAllText("testResponse.json");
var response = PubTatorResponse.ParseString(text);
Assert.IsTrue(response.Passages.Any(passage => passage.Offset == 99));
}
public void GeneralTotalParseTest()
{
var text = System.IO.File.ReadAllText("testResponse.json");
var response = PubTatorResponse.ParseString(text);
Assert.AreEqual("20085714", response.Id);
Assert.AreEqual(2010, response.Year);
Assert.IsTrue(response.Created.Equals(DateTimeOffset.FromUnixTimeMilliseconds(1572526582545)
.DateTime));
}
public PubTatorResponse GetArticleByPmId(string id)
{
var response = Client.GetAsync("?pmids=" + id).Result;
if (response.IsSuccessStatusCode)
{
return(PubTatorResponse.ParseString(response.Content.ReadAsStringAsync().Result));
}
throw new HttpRequestException("This request failed :( " + response.StatusCode);
}
/// <summary>
/// This function returns the article results assuming you have more than one variable
/// </summary>
/// <param name="id">A list of ids in any form that can be looped over</param>
/// <returns></returns>
/// <exception cref="HttpRequestException"></exception>
public PubTatorResponse[] GetArticleByPmId(IEnumerable <string> id)
{
var requestUri = "?pmids=";
var i = false;
foreach (var s in id) //Simple loop to add every id to the end
{
if (!i)
{
i = true;
requestUri += s;
continue;
}
requestUri += "," + s;
}
var response = Client.GetAsync(requestUri).Result;
if (!response.IsSuccessStatusCode)
{
throw new HttpRequestException("This request failed :( " + response.StatusCode);
}
var contentString = response.Content.ReadAsStringAsync().Result;
var pubArray = new List <PubTatorResponse>();
var iter = 0;
foreach (var s in contentString.Split("\n"))
{
if (iter == contentString.Split("\n").Length - 1)
{
break;
}
try
{
pubArray.Add(PubTatorResponse.ParseString(s));
}
catch (Exception e)
{
Console.WriteLine(e);
}
iter++;
}
return(pubArray.ToArray());
}
