public ServerService()
{
service = new UploadServiceClient();
service.PublishDocumentCompleted += new EventHandler <PublishDocumentCompletedEventArgs>(service_PublishDocumentCompleted);
progressBar = new ProgressBarDlg();
progressBar.SetMax(100);
}
private void buttonBuildLUT_Click(object sender, EventArgs e)
{
if (beadCenterPosList.Count == 0)
{
MessageBox.Show("No beads selected");
return;
}
CheckBeadPos();
var dlg = new ProgressBarDlg();
dlg.Show(new Action(delegate
{
using (QTrkInstance inst = new QTrkInstance(settings.trackerConfig))
{
inst.SetRadialZLUTSize(beadCenterPosList.Count, numLUTSteps);
inst.BeginLUT(true);
int roi = settings.ROI;
using (FloatImg tmp = new FloatImg(roi, roi * beadCenterPosList.Count))
{
for (int i = 0; i < numLUTSteps; i++)
{
string path = lutFiles[i];
if (!File.Exists(path))
{
MessageBox.Show("File " + path + " missing");
break;
}
dlg.Update(i / (float)numLUTSteps, path, string.Format("Processing LUT Frame {0}/{1}", i, numLUTSteps));
using (Bitmap bmp = new Bitmap(path))
{
if (bmp.Size != imageSize)
{
MessageBox.Show(string.Format("{0} has invalid size {1},{2}", path, bmp.Width, bmp.Height));
break;
}
using (var fi = new FloatImg(bmp, 0))
{
// build one image with all beads
for (int b = 0; b < beadCenterPosList.Count; b++)
{
fi.CopySubimage(tmp, beadCenterPosList[b].x - roi / 2, beadCenterPosList[b].y - roi / 2, 0, roi * b, roi, roi);
}
inst.BuildLUT(tmp, i);
}
}
}
}
inst.FinalizeLUT();
lut = inst.GetRadialZLUT();
}
}));
UpdateFileLists();
tabControl.SelectedTab = tabPageTrack;
}
/// <summary>
/// Method for converting a specification.
/// </summary>
/// <param name="oldfile"></param>
/// <param name="newfile"></param>
public static void ConvertFile(string oldfile, string newfile)
{
XmlTextReader xmlIn = null;
XmlTextWriter xmlOut = null;
ProgressBarDlg dlg = new ProgressBarDlg();
dlg.Text = "Converting " + oldfile.Substring(oldfile.LastIndexOf("\\") + 1) + "...";
dlg.OkayPressed += new EventHandler(dlg_OkayPressed);
dlg.Show();
try
{
FileStream fin = new FileStream(oldfile, FileMode.Open);
xmlIn = new XmlTextReader(new StreamReader(fin));
xmlIn.XmlResolver = null;
dlg.Minimum = 0;
dlg.Value = 0;
dlg.Maximum = (int)fin.Length;
FileStream fout = new FileStream(newfile, FileMode.Create);
xmlOut = new XmlTextWriter(fout, System.Text.Encoding.UTF8);
xmlOut.Formatting = Formatting.Indented;
xmlOut.Indentation = 2;
xmlOut.WriteStartDocument();
bool done = false;
while (xmlIn.Read() && !dlg.Canceling)
{
done = false;
if (xmlIn.NodeType == XmlNodeType.Element)
{
switch (xmlIn.Name)
{
case STATIC_TAG:
xmlOut.WriteStartElement(CONSTANT_TAG);
break;
case REFSTRING_TAG:
xmlOut.WriteStartElement(NEW_REFVALUE_TAG);
break;
case REFVALUE_TAG:
xmlOut.WriteStartElement(NEW_REFVALUE_TAG);
break;
case OLD_SELECTION_TYPE:
HandleSelectionType(xmlIn, xmlOut);
done = true;
break;
case APPLY_TYPE_TAG:
HandleTypeTag(xmlIn, xmlOut);
done = true;
break;
case TYPE_TAG:
HandleTypeTag(xmlIn, xmlOut);
done = true;
break;
default:
xmlOut.WriteStartElement(xmlIn.Name);
break;
}
if (done)
{
continue;
}
bool empty = xmlIn.IsEmptyElement;
// write out the attributes of this node
if (xmlIn.HasAttributes)
{
xmlIn.MoveToFirstAttribute();
for (int i = 0; i < xmlIn.AttributeCount; i++)
{
switch (xmlIn.Name)
{
case VERSION_ATTRIBUTE:
xmlOut.WriteAttributeString(VERSION_ATTRIBUTE, NEW_SPEC_VERSION);
break;
default:
xmlOut.WriteAttributeString(xmlIn.Name, xmlIn.Value);
break;
}
xmlIn.MoveToNextAttribute();
}
}
// we don't get an end element if this is an
// empty element
if (empty)
{
xmlOut.WriteEndElement();
}
}
else if (xmlIn.NodeType == XmlNodeType.Text)
{
xmlOut.WriteString(xmlIn.Value);
}
else if (xmlIn.NodeType == XmlNodeType.EndElement)
{
xmlOut.WriteEndElement();
}
else if (xmlIn.NodeType == XmlNodeType.Comment)
{
xmlOut.WriteComment(xmlIn.Value);
}
dlg.Value = (int)fin.Position;
}
xmlOut.WriteEndDocument();
}
catch (Exception e)
{
MessageBox.Show("Exception: " + e.Message);
}
finally
{
if (xmlIn != null)
{
xmlIn.Close();
}
if (xmlOut != null)
{
xmlOut.Close();
}
if (dlg.Canceling)
{
File.Delete(newfile);
dlg.Dispose();
}
}
}
/// <summary>
/// Method for converting a specification.
/// </summary>
/// <param name="oldfile"></param>
/// <param name="newfile"></param>
public static void ConvertFile(string oldfile, string newfile)
{
XmlTextReader xmlIn = null;
XmlTextWriter xmlOut = null;
ProgressBarDlg dlg = new ProgressBarDlg();
dlg.Text = "Converting " + oldfile.Substring(oldfile.LastIndexOf("\\") + 1) + "...";
dlg.OkayPressed += new EventHandler(dlg_OkayPressed);
dlg.Show();
try
{
FileStream fin = new FileStream(oldfile, FileMode.Open);
xmlIn = new XmlTextReader(new StreamReader(fin));
xmlIn.XmlResolver = null;
dlg.Minimum = 0;
dlg.Value = 0;
dlg.Maximum = (int)fin.Length;
FileStream fout = new FileStream(newfile, FileMode.Create);
xmlOut = new XmlTextWriter(fout, System.Text.Encoding.UTF8);
xmlOut.Formatting = Formatting.Indented;
xmlOut.Indentation = 2;
xmlOut.WriteStartDocument();
while (xmlIn.Read() && !dlg.Canceling)
{
if (xmlIn.NodeType == XmlNodeType.Element)
{
switch (xmlIn.Name)
{
case MAP_TAG:
HandleMap(xmlIn, xmlOut);
break;
case MINIMUM_TAG:
HandleStaticTag(xmlIn, xmlOut);
break;
case MAXIMUM_TAG:
HandleStaticTag(xmlIn, xmlOut);
break;
case INCREMENT_TAG:
HandleStaticTag(xmlIn, xmlOut);
break;
case AVERAGE_TAG:
HandleStaticTag(xmlIn, xmlOut);
break;
case EQUALS_TAG:
HandleStaticTag(xmlIn, xmlOut);
break;
case GREATERTHAN_TAG:
HandleStaticTag(xmlIn, xmlOut);
break;
case LESSTHAN_TAG:
HandleStaticTag(xmlIn, xmlOut);
break;
case VALUE_LABEL_TAG:
xmlOut.WriteStartElement(NEW_VALUE_LABEL_TAG);
break;
case OLD_ITEMS_TAG:
xmlOut.WriteStartElement(ITEM_COUNT_TAG);
break;
case OLD_SELECTION_TYPE:
xmlOut.WriteStartElement(SELECTION_TYPE_TAG);
break;
case OBJECT_REF_TAG:
// this element has been removed
break;
case VALUE_SPACE_TAG:
// this element has been removed
break;
default:
bool empty = xmlIn.IsEmptyElement;
xmlOut.WriteStartElement(xmlIn.Name);
// write out the attributes of this node
if (xmlIn.HasAttributes)
{
xmlIn.MoveToFirstAttribute();
for (int i = 0; i < xmlIn.AttributeCount; i++)
{
switch (xmlIn.Name)
{
case ACCESS_ATTRIBUTE:
if (xmlIn.Value == ACCESS_READ_ONLY)
{
xmlOut.WriteAttributeString(ACCESS_ATTRIBUTE, NEW_READ_ONLY);
}
else
{
throw new SpecParseException(xmlIn.LineNumber, ACCESS_ATTRIBUTE + " with unexpected value.");
}
break;
case PREFERRED_ATTRIBUTE:
// this attribute doesn't exist anymore
break;
case VERSION_ATTRIBUTE:
xmlOut.WriteAttributeString(VERSION_ATTRIBUTE, NEW_SPEC_VERSION);
break;
case OLD_TYPE_NAME_ATTR:
xmlOut.WriteAttributeString(TYPE_NAME_ATTRIBUTE, xmlIn.Value);
break;
default:
xmlOut.WriteAttributeString(xmlIn.Name, xmlIn.Value);
break;
}
xmlIn.MoveToNextAttribute();
}
}
// we don't get an end element if this is an
// empty element
if (empty)
{
xmlOut.WriteEndElement();
}
break;
}
}
else if (xmlIn.NodeType == XmlNodeType.Text)
{
xmlOut.WriteString(xmlIn.Value);
}
else if (xmlIn.NodeType == XmlNodeType.EndElement)
{
if (xmlIn.Name != VALUE_SPACE_TAG)
{
xmlOut.WriteEndElement();
}
}
dlg.Value = (int)fin.Position;
}
xmlOut.WriteEndDocument();
}
catch (Exception e)
{
MessageBox.Show("Exception: " + e.Message);
}
finally
{
if (xmlIn != null)
{
xmlIn.Close();
}
if (xmlOut != null)
{
xmlOut.Close();
}
if (dlg.Canceling)
{
File.Delete(newfile);
dlg.Dispose();
}
}
}