public BuildSummaryOptions()
{
MergeResult = true;
KeepTopPeptideFromSameEngineButDifferentSearchParameters = true;
SavePeptidesFile = true;
IsSemiPeptideConsiderAsUnique = true;
Database = new DatabaseOptions();
FalseDiscoveryRate = new FalseDiscoveryRateOptions();
Classification = new ClassificationOptions();
PeptideFilter = new PeptideFilterOptions();
DatasetList = new DatasetListOptions();
ConflictType = ResolveSearchEngineConflictTypeFactory.QValue;
MinimumEngineAgreeCount = 1;
PeptideRetrieval = false;
}
public void Test()
{
PeptideFilterOptions option = new PeptideFilterOptions()
{
FilterBySequenceLength = true, MinSequenceLength = 6
};
XElement root = new XElement("Root");
option.Save(root);
PeptideFilterOptions target = new PeptideFilterOptions();
target.Load(root);
Assert.AreEqual(option.FilterBySequenceLength, target.FilterBySequenceLength);
Assert.AreEqual(option.MinSequenceLength, target.MinSequenceLength);
}