public ArrayList ComputeTheValues(ref int TotalHeight)
{
if (SequenceLength >= 2000 && SequenceLength < 5000)
{
BIGSEG = 500;
SMALLSEG = 50;
}
else if (SequenceLength > 5000 && SequenceLength < 20000)
{
BIGSEG = 1000;
SMALLSEG = 100;
}
else if (SequenceLength >= 20000)
{
BIGSEG = 5000;
SMALLSEG = 500;
}
else
{
BIGSEG = 100;
SMALLSEG = 10;
}
//Height += TotalPeptides * PEPROWHEIGHT;
int EndLength = ((SequenceLength / SMALLSEG) + 1) * SMALLSEG;
int smallStepNumber = EndLength / SMALLSEG;
float smallstep = NETWIDTH / (float)smallStepNumber;
UNIT = smallstep / SMALLSEG;
string strSQL = string.Format("select a.pp_relation_seq,a.location,b.peptide_sequence,b.sequence_length,b.peptide_sequence,a.unique_peptide from pp_relation_tbl a, peptide_tbl b where b.peptide_sequence= a.peptide_sequence and a.location <> -1 and a.protein_id='{0}' order by a.location", ProteinID);
//DBInterface.ConnectDB();
DataSet result = DBInterface.QuerySQL2(strSQL);
int i = 0;
ArrayList PepRectArray = new ArrayList();
int MaxRight = 0;
int row = 0;
int MaxRow = 1;
if (result != null)
{
for (int j=0;j<result.Tables[0].Rows.Count ;j++)
{
int location = int.Parse (result.Tables[0].Rows[j].ItemArray[1].ToString ()) ;// GetInt64(1);
string pepid = result.Tables[0].Rows[j].ItemArray[2].ToString ();
int length = int.Parse (result.Tables[0].Rows[j].ItemArray[3].ToString ());
if (location >= MaxRight)
{
row = 0;
}
PepRectInfo pri = new PepRectInfo();
pri.Sequence = result.Tables[0].Rows[j].ItemArray[4].ToString ();
pri.PepID = pepid;
pri.Location = location;
pri.Length = length;
pri.left = (int)(location * UNIT + MARGIN) ;
pri.top = row * PEPROWHEIGHT + AXISY + 30;
pri.bottom = pri.top + (int)(PEPROWHEIGHT / 2);
pri.right = MARGIN + (int)((length+location ) * UNIT) ;
if (pri.right - pri.left < 2)
pri.right = pri.left + 2;
if (result.Tables[0].Rows[j].ItemArray[5].ToString() =="0")
pri.bUnique = false;
else
pri.bUnique = true;
PepRectArray.Add(pri);
i += 1;
row += 1;
if (row > MaxRow)
{
MaxRow = row;
}
if (location + length > MaxRight)
{
MaxRight = location + length;
}
}
}
//DBInterface.CloseDB();
TotalHeight = Height + MaxRow * PEPROWHEIGHT;
return PepRectArray;
}
public ArrayList ComputeTheValues(ref int TotalHeight)
{
if (SequenceLength >= 2000 && SequenceLength < 5000)
{
BIGSEG = 500;
SMALLSEG = 50;
}
else if (SequenceLength > 5000 && SequenceLength < 20000)
{
BIGSEG = 1000;
SMALLSEG = 100;
}
else if (SequenceLength >= 20000)
{
BIGSEG = 5000;
SMALLSEG = 500;
}
else
{
BIGSEG = 100;
SMALLSEG = 10;
}
//Height += TotalPeptides * PEPROWHEIGHT;
int EndLength = ((SequenceLength / SMALLSEG) + 1) * SMALLSEG;
int smallStepNumber = EndLength / SMALLSEG;
float smallstep = NETWIDTH / (float)smallStepNumber;
UNIT = smallstep / SMALLSEG;
string strSQL = string.Format("select a.pp_relation_seq,a.location,b.peptide_sequence,b.sequence_length,b.peptide_sequence,a.unique_peptide from pp_relation_tbl a, peptide_tbl b where b.peptide_sequence= a.peptide_sequence and a.location <> -1 and a.protein_id='{0}' order by a.location", ProteinID);
//DBInterface.ConnectDB();
DataSet result = DBInterface.QuerySQL2(strSQL);
int i = 0;
ArrayList PepRectArray = new ArrayList();
int MaxRight = 0;
int row = 0;
int MaxRow = 1;
if (result != null)
{
for (int j = 0; j < result.Tables[0].Rows.Count; j++)
{
int location = int.Parse(result.Tables[0].Rows[j].ItemArray[1].ToString());// GetInt64(1);
string pepid = result.Tables[0].Rows[j].ItemArray[2].ToString();
int length = int.Parse(result.Tables[0].Rows[j].ItemArray[3].ToString());
if (location >= MaxRight)
{
row = 0;
}
PepRectInfo pri = new PepRectInfo();
pri.Sequence = result.Tables[0].Rows[j].ItemArray[4].ToString();
pri.PepID = pepid;
pri.Location = location;
pri.Length = length;
pri.left = (int)(location * UNIT + MARGIN);
pri.top = row * PEPROWHEIGHT + AXISY + 30;
pri.bottom = pri.top + (int)(PEPROWHEIGHT / 2);
pri.right = MARGIN + (int)((length + location) * UNIT);
if (pri.right - pri.left < 2)
{
pri.right = pri.left + 2;
}
if (result.Tables[0].Rows[j].ItemArray[5].ToString() == "0")
{
pri.bUnique = false;
}
else
{
pri.bUnique = true;
}
PepRectArray.Add(pri);
i += 1;
row += 1;
if (row > MaxRow)
{
MaxRow = row;
}
if (location + length > MaxRight)
{
MaxRight = location + length;
}
}
}
//DBInterface.CloseDB();
TotalHeight = Height + MaxRow * PEPROWHEIGHT;
return(PepRectArray);
}