public NucleotideCouple buildCoupleFromOneSingle(Nucleotide n, bool reverse = false)
{
if (n.isPaired)
{
return(null);
}
GameObject couple = Instantiate(couplePrefab) as GameObject;
couple.transform.position = n.transform.position;
couple.transform.rotation = n.transform.rotation;
if (!reverse)
{
couple.gameObject.GetComponent <NucleotideCouple>().setType(n.type, getPairType(n.type));
Color c = n.getColor();
couple.gameObject.GetComponent <NucleotideCouple>().setLeftColor(c);
couple.gameObject.GetComponent <NucleotideCouple>().setRightColor(Color.white);
}
else
{
couple.gameObject.GetComponent <NucleotideCouple>().setType(getPairType(n.type), n.type);
Color c = n.getColor();
couple.gameObject.GetComponent <NucleotideCouple>().setRightColor(c);
couple.gameObject.GetComponent <NucleotideCouple>().setLeftColor(Color.white);
}
couple.gameObject.GetComponent <NucleotideCouple>().tag = "NucleotideCouple";
Destroy(n.gameObject);
return(couple.gameObject.GetComponent <NucleotideCouple>());
}
public NucleotideCouple buildHalfCoupleChainFromOneSingle(Nucleotide chain)
{
if (chain.isPaired)
{
return(null);
}
chain = getHeadOfSingleChain(chain);
Nucleotide nhead = chain;
NucleotideCouple n = (Instantiate(couplePrefab) as GameObject).GetComponent <NucleotideCouple>();
NucleotideCouple head = n;
n.setLeftColor(chain.getColor());
n.setType(chain.type, Nucleotide.Type.Empty);
n.needHelix = false;
while (chain.next)
{
chain = chain.next;
n.next = (Instantiate(couplePrefab) as GameObject).GetComponent <NucleotideCouple>();
n.next.setLeftColor(chain.getColor());
n.next.setType(chain.type, Nucleotide.Type.Empty);
n.next.prev = n;
n.next.needHelix = false;
n.next.transform.rotation = nhead.transform.rotation;
n = n.next;
}
head.transform.rotation = nhead.transform.rotation;
head.transform.position = nhead.transform.position;
head.broadcastUpdateTransform();
destroySingleChain(chain);
return(head);
}
public NucleotideCouple buildCoupleChainFromTwoSingles(Nucleotide c1, Nucleotide c2, Vector3 position = default(Vector3))
{
if (c1.isPaired || c2.isPaired)
{
return(null);
}
if (getLengthOfSingleChain(c1) != getLengthOfSingleChain(c2))
{
return(null);
}
c1 = getHeadOfSingleChain(c1);
if (c1 == getHeadOfSingleChain(c2))
{
return(null);
}
c2 = getTailOfSingleChain(c2);
NucleotideCouple n = (Instantiate(couplePrefab) as GameObject).GetComponent <NucleotideCouple>();
NucleotideCouple head = n;
n.setLeftColor(c1.getColor());
n.setRightColor(c2.getColor());
n.setType(c1.type, c2.type);
while (c1.next)
{
c1 = c1.next;
c2 = c2.prev;
n.next = (Instantiate(couplePrefab) as GameObject).GetComponent <NucleotideCouple>();
n.next.setLeftColor(c1.getColor());
n.next.setRightColor(c2.getColor());
n.next.setType(c1.type, c2.type);
n.next.prev = n;
n = n.next;
}
head.transform.position = position;
head.broadcastUpdateTransform();
destroySingleChain(c1);
destroySingleChain(c2);
return(n);
}