private void bgWorker_Process_RunWorkerCompleted(object sender, RunWorkerCompletedEventArgs e)
{
try
{
// _MultiNGlycan.ExportParametersToExcel();
if (DoLog)
{
Logger.WriteLog("Start merge peaks");
}
lblStatus.Text = "Mergeing Peaks";
if (_MultiNGlycan.LabelingMethod == enumGlycanLabelingMethod.MultiplexPermethylated)
{
SecondPassedForMultiplexPermethylated.Processing(ref _MultiNGlycan);
}
//if (_MultiNGlycan.TwoPassedID)
//{
// // _MultiNGlycan.Merge2PassedCluster();
// _MultiNGlycan.MergeSingleScanResultToPeak();
//}
//else
//{
// _MultiNGlycan.MergeCluster();
_MultiNGlycan.MergeSingleScanResultToPeak();
_MultiNGlycan.SolveDuplicateAssignment();
_MultiNGlycan.MergeSingleScanResultToPeak();
//}
if (DoLog)
{
Logger.WriteLog("End merge peaks");
}
if (_MultiNGlycan.GlycanLCorderExist)
{
_MultiNGlycan.ApplyLCordrer();
}
if (!Directory.Exists(_MultiNGlycan.ExportFilePath + "\\Pic") && (_MultiNGlycan.IndividualImgs || _MultiNGlycan.QuantificationImgs))
{
Directory.CreateDirectory(_MultiNGlycan.ExportFilePath + "\\Pic");
}
if (_MultiNGlycan.LabelingMethod == GlycoLib.enumGlycanLabelingMethod.MultiplexPermethylated)
{
_MultiNGlycan.EstimatePurity();
foreach (GlycoLib.enumLabelingTag tag in _MultiNGlycan.LabelingRatio.Keys)
{
if (tag == enumLabelingTag.MP_CH3 || !_MultiNGlycan.HasEstimatePurity((tag)))
{
continue;
}
_MultiNGlycan.GetPurityEstimateImage(tag, _MultiNGlycan.ExportFilePath + "\\Pic\\EstimatePurity_" + tag.ToString() + ".png");
}
//Correct Intensity;
//_MultiNGlycan.CorrectIntensityByIsotope();
}
if (DoLog)
{
;
Logger.WriteLog("Start export");
}
lblStatus.Text = "Exporting";
_MultiNGlycan.ExportToCSV();
//Get individual image
if (_MultiNGlycan.IndividualImgs &&
File.Exists(_MultiNGlycan.ExportFilePath + "\\" + Path.GetFileName(_MultiNGlycan.ExportFilePath) +
"_FullList.csv"))
{
//GenerateImages.GenGlycanLcImg(
// _MultiNGlycan.ExportFilePath + "\\" + Path.GetFileName(_MultiNGlycan.ExportFilePath) +"_FullList.csv",
// _MultiNGlycan.ExportFilePath);
GenerateImages.GenGlycanLcImg(_MultiNGlycan);
}
//Get Quant Image
if (_MultiNGlycan.LabelingMethod != enumGlycanLabelingMethod.None && _MultiNGlycan.QuantificationImgs &&
File.Exists(_MultiNGlycan.ExportFilePath + "\\" + Path.GetFileName(_MultiNGlycan.ExportFilePath) +
"_Quant.csv"))
{
GenerateImages.GenQuantImg(
_MultiNGlycan.ExportFilePath + "\\" + Path.GetFileName(_MultiNGlycan.ExportFilePath) + "_Quant.csv",
_MultiNGlycan.LabelingMethod,
_MultiNGlycan.ExportFilePath);
}
//_MultiNGlycan.ExportToExcel();
if (DoLog)
{
Logger.WriteLog("End export");
}
TimeSpan TDiff = DateTime.Now.Subtract(Start);
lblStatus.Text = "Finish in " + TDiff.TotalMinutes.ToString("0.00") + " mins";
lblNumberOfMerge.Text = _MultiNGlycan.MergedResultList.Count.ToString();
progressBar1.Value = 100;
lblPercentage.Text = "100%";
FlashWindow.Flash(this);
this.Text = "Done";
if (DoLog)
{
Logger.WriteLog("End process each scan");
}
}
catch (Exception ex)
{
throw ex;
}
}
